On Mon, May 2, 2011 at 1:04 PM, Adriano Vilela Barbosa
<adriano.vil...@gmail.com> wrote:
> On Sat, Apr 30, 2011 at 3:23 AM, Francesc Alted <fal...@pytables.org> wrote:
>> 2011/4/28 Adriano Vilela Barbosa <adriano.vil...@gmail.com>
>>>
>>> Hello,
>>>
>>> When trying to install Pytables on Mac OS 10.6 using easy_install, I
>>> run into the following error:
>>>
>>> mleblanc-vm:~ adriano$ easy_install tables
>>> Searching for tables
>>> Reading http://pypi.python.org/simple/tables/
>>> Reading http://www.pytables.org/
>>> Best match: tables 2.2.1
>>> Downloading
>>> http://www.pytables.org/download/pytables-2.2.1/tables-2.2.1.tar.gz
>>> Processing tables-2.2.1.tar.gz
>>> Running tables-2.2.1/setup.py -q bdist_egg --dist-dir
>>>
>>> /var/folders/p2/p2Bhi9AYGIa9Cj+b58XKmU+++TI/-Tmp-/easy_install-klsC3N/tables-2.2.1/egg-dist-tmp-JL9Lip
>>> .. ERROR:: You need numpy 1.4.1 or greater to run PyTables!
>>> error: Setup script exited with 1
>>
>> What's the output of this in your python shell?
>>>>> import numpy
>>>>> print numpy.__version__
>>
>
> The output of this command is 1.5.1. That's exactly the command I used
> to find out the version of numpy that I have.
>
> I have just noticed that I have another numpy installation whose
> version is 1.2.1, located at
>
> /System/Library/Frameworks/Python.framework/Versions/2.6/Extras/lib/python/numpy
>
> Apparently, this came with Mac OS itself. So maybe the problem is that
> this is the numpy version detected during the pytables installation?
> The newer version of numpy, which was installed through easy_install,
> is located at
>
> /Library/Python/2.6/site-packages/numpy-1.5.1-py2.6-macosx-10.6-universal.egg/numpy
>
> and, as I said before, is version 1.5.1.
>
> If the problem is indeed that the older version of numpy is detected
> when running "easy_install tables", I guess I have to pass it some
> command line arguments in order to direct it to the newer numpy?
>
> Thank you,
>
> Adriano
>
>>>
>>> However, I have numpy 1.5.1 installed, which was also installed
>>> through easy_install. Does anyone know how to work around this?
>>>
>>> Any help is much appreciated.
>>>
>>> Adriano
>>>
>>
>> --
>> Francesc Alted
>>
>
So, I solved the problem. I moved the folder with the older numpy installation
/System/Library/Frameworks/Python.framework/Versions/2.6/Extras/lib/python/numpy
out of the way (by temporarily renaming it to something else) and then
the problem went away. However, I now run into a compile error when
trying to install pytables using either easy_install or pip. Here's
the error messages pip returns:
lipo: can't figure out the architecture type of:
/var/folders/p2/p2Bhi9AYGIa9Cj+b58XKmU+++TI/-Tmp-//ccHB591s.out
error: Command "gcc-4.2 -fno-strict-aliasing -fno-common -dynamic
-DNDEBUG -g -fwrapv -Os -Wall -Wstrict-prototypes -DENABLE_DTRACE
-arch i386 -arch ppc -arch x86_64 -pipe -DNDEBUG=1 -DHAVE_LZO2_LIB=1
-DHAVE_BZ2_LIB=1 -Iblosc
-I/Library/Python/2.6/site-packages/numpy-1.5.1-py2.6-macosx-10.6-universal.egg/numpy/core/include
-I/usr/include -I/usr/local/include
-I/System/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6
-c tables/linkExtension.c -o
build/temp.macosx-10.6-universal-2.6/tables/linkExtension.o -Isrc
-DH5_USE_16_API" failed with exit status 1
----------------------------------------
Command /usr/bin/python -c "import
setuptools;__file__='/Users/adriano/build/tables/setup.py';exec(compile(open(__file__).read().replace('\r\n',
'\n'), __file__, 'exec'))" install --single-version-externally-managed
--record
/var/folders/p2/p2Bhi9AYGIa9Cj+b58XKmU+++TI/-Tmp-/pip-stG4KW-record/install-record.txt
failed with error code 1
Storing complete log in /Users/adriano/.pip/pip.log
Does anybody have any ideas about how to fix this?
Thanks a lot,
Adriano
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