I'm not sure whether this is related, but your quoting for --rpath
doesn't appear to work:

On 10.10.2017 14:17, Brian Sidebotham wrote:
> LDFLAGS='-Wl,-rpath=$\\$$ORIGIN/../lib' \
> ...
> gcc -pthread -Wl,-rpath=RIGIN/../lib -fprofile-generate  -Xlinker 
> -export-dynamic -o python \
>               Modules/python.o \
>               -L. -lpython2.7 -lpthread -ldl  -lutil   -lm  

The CONFIG_ARGS variable should always be set, so I assume that
your _sysconfigdata.py was generated in a previous broken build.

-- 
Marc-Andre Lemburg
eGenix.com

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