On Wednesday, January 23, 2013 8:40:54 AM UTC-6, Oscar Benjamin wrote: > On 23 January 2013 14:28, Isaac Won <winef...@gmail.com> wrote: > > > On Wednesday, January 23, 2013 4:08:13 AM UTC-6, Oscar Benjamin wrote: > > > > > > To Oscar > > > My actual error message is: > > > File > > "/lustre/work/apps/python-2.7.1/lib/python2.7/site-packages/scipy/interpolate/interpolate.py", > > line 311, in __init__ > > > self._spline = splmake(x,oriented_y,order=order) > > > File > > "/lustre/work/apps/python-2.7.1/lib/python2.7/site-packages/scipy/interpolate/interpolate.py", > > line 809, in splmake > > > coefs = func(xk, yk, order, conds, B) > > > File > > "/lustre/work/apps/python-2.7.1/lib/python2.7/site-packages/scipy/interpolate/interpolate.py", > > line 530, in _find_smoothest > > > u,s,vh = np.dual.svd(B) > > > File > > "/lustre/work/apps/python-2.7.1/lib/python2.7/site-packages/scipy/linalg/decomp_svd.py", > > line 91, in svd > > > full_matrices=full_matrices, overwrite_a = overwrite_a) > > > MemoryError > > > > Are you sure that's the *whole* error message? The traceback only > > refers to the scipy modules. I can't see the line from your code that > > is generating the error. > > > > > > Oscar
Dear Oscar, Following is full error message after I adjusted following Ulich's advice: interp = interp1d(indices[not_nan], x[not_nan], kind = 'quadratic') File "/lustre/work/apps/python-2.7.1/lib/python2.7/site-packages/scipy/interpolate/interpolate.py", line 311, in __init__ self._spline = splmake(x,oriented_y,order=order) File "/lustre/work/apps/python-2.7.1/lib/python2.7/site-packages/scipy/interpolate/interpolate.py", line 809, in splmake coefs = func(xk, yk, order, conds, B) File "/lustre/work/apps/python-2.7.1/lib/python2.7/site-packages/scipy/interpolate/interpolate.py", line 530, in _find_smoothest u,s,vh = np.dual.svd(B) File "/lustre/work/apps/python-2.7.1/lib/python2.7/site-packages/scipy/linalg/decomp_svd.py", line 91, in svd full_matrices=full_matrices, overwrite_a = overwrite_a) MemoryError ---------------------------------------------------------------------- Thank you, Hoonill -- http://mail.python.org/mailman/listinfo/python-list