Your message dated Sun, 15 Dec 2019 22:00:04 +0000
with message-id <[email protected]>
and subject line Bug#943923: fixed in python-apptools 4.4.0-4
has caused the Debian Bug report #943923,
regarding python-apptools: please stop build-depending on python-pandas
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
943923: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=943923
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: python-apptools
Version: 4.4.0-3
Control: block 937296 by -1
Control: tags -1 patch
pandas upstream dropped Python 2 support in 0.25 (before adding Python
3.8 support). As further discussed in #937296, the Debian package
python-pandas is currently part of a big tangle of circular
(build-)dependencies, but can be cut out of that tangle by removing the
build-dependencies from python-apptools and matplotlib2.
Hence, please apply the attached patch to drop the python-pandas build
dependency and allow the test suite to be run without it.
diff -Nru python-apptools-4.4.0/debian/changelog
python-apptools-4.4.0/debian/changelog
--- python-apptools-4.4.0/debian/changelog 2019-03-05 20:26:46.000000000
+0000
+++ python-apptools-4.4.0/debian/changelog 2019-10-31 21:42:13.000000000
+0000
@@ -1,3 +1,10 @@
+python-apptools (4.4.0-4) UNRELEASED; urgency=medium
+
+ * Stop build-depending on python-pandas,
+ and fix resulting test issues.
+
+ -- Rebecca N. Palmer <[email protected]> Thu, 31 Oct 2019 21:42:13
+0000
+
python-apptools (4.4.0-3) unstable; urgency=medium
* Fixing broken links in python-apptools-doc
diff -Nru python-apptools-4.4.0/debian/control
python-apptools-4.4.0/debian/control
--- python-apptools-4.4.0/debian/control 2019-03-05 20:26:46.000000000
+0000
+++ python-apptools-4.4.0/debian/control 2019-10-31 21:33:48.000000000
+0000
@@ -11,7 +11,6 @@
python-setuptools,
python-traits,
python-tables,
- python-pandas,
python-nose,
python-configobj,
python3-all,
diff -Nru python-apptools-4.4.0/debian/patches/series
python-apptools-4.4.0/debian/patches/series
--- python-apptools-4.4.0/debian/patches/series 2019-03-05 20:26:46.000000000
+0000
+++ python-apptools-4.4.0/debian/patches/series 2019-10-31 21:42:13.000000000
+0000
@@ -4,3 +4,4 @@
dont_delete_tmp
skip_test_file_properties
man_page_section
+test_without_pandas
diff -Nru python-apptools-4.4.0/debian/patches/test_without_pandas
python-apptools-4.4.0/debian/patches/test_without_pandas
--- python-apptools-4.4.0/debian/patches/test_without_pandas 1970-01-01
01:00:00.000000000 +0100
+++ python-apptools-4.4.0/debian/patches/test_without_pandas 2019-10-31
21:42:13.000000000 +0000
@@ -0,0 +1,52 @@
+Description: Allow importing H5TableNode without pandas
+
+Needed to run the test suite without python-pandas.
+
+Author: Rebecca N. Palmer <[email protected]>
+Bug-Debian: https://bugs.debian.org/<bugnumber>
+Forwarded: no
+
+--- python-apptools-4.4.0.orig/apptools/io/h5/table_node.py
++++ python-apptools-4.4.0/apptools/io/h5/table_node.py
+@@ -1,5 +1,8 @@
+ import numpy as np
+-from pandas import DataFrame
++try:
++ from pandas import DataFrame
++except ImportError:
++ DataFrame = None
+ from tables.table import Table as PyTablesTable
+
+
+@@ -116,6 +119,8 @@ class H5TableNode(object):
+ XXX: This does not work if the table contains a multidimensional
column
+ """
+ # Slicing rows gives a numpy struct array, which DataFrame
understands.
++ if DataFrame is None:
++ raise ImportError("to_dataframe requires pandas, which was not
found")
+ return DataFrame(self.ix[:])
+
+
#--------------------------------------------------------------------------
+--- python-apptools-4.4.0.orig/apptools/io/h5/tests/test_table_node.py
++++ python-apptools-4.4.0/apptools/io/h5/tests/test_table_node.py
+@@ -1,6 +1,10 @@
+ import numpy as np
+ from numpy.testing import assert_allclose
+-from pandas import DataFrame
++from numpy.testing.decorators import skipif
++try:
++ from pandas import DataFrame
++except ImportError:
++ DataFrame = None
+
+ from ..table_node import H5TableNode
+ from .utils import temp_h5_file
+@@ -46,7 +50,7 @@ def test_keys():
+ h5table = H5TableNode.add_to_h5file(h5, NODE, description)
+ assert set(h5table.keys()) == keys
+
+-
++@skipif(DataFrame == None, "requires pandas")
+ def test_to_dataframe():
+ description = [('a', np.float64)]
+ with temp_h5_file() as h5:
--- End Message ---
--- Begin Message ---
Source: python-apptools
Source-Version: 4.4.0-4
We believe that the bug you reported is fixed in the latest version of
python-apptools, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Sandro Tosi <[email protected]> (supplier of updated python-apptools package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Sun, 15 Dec 2019 16:08:24 -0500
Source: python-apptools
Architecture: source
Version: 4.4.0-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Python Modules Team
<[email protected]>
Changed-By: Sandro Tosi <[email protected]>
Closes: 935202 937577 943923
Changes:
python-apptools (4.4.0-4) unstable; urgency=medium
.
[ Ondřej Nový ]
* d/copyright: Change Format URL to correct one.
* Bump Standards-Version to 4.4.1.
.
[ Sandro Tosi ]
* Drop python2 support; Closes: #943923, #937577, #935202
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