Your message dated Sat, 11 Apr 2015 17:07:58 +0100 with message-id <CAB4XWXz6xGR8x1+j2dPdATHfbB=j5cd+xdehmmd+3m5_yua...@mail.gmail.com> and subject line Re: [Python-modules-team] Bug#735776: python-networkx: networkx raises TypeError when reading input from .gml file has caused the Debian Bug report #735776, regarding python-networkx: networkx raises TypeError when reading input from .gml file to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 735776: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=735776 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Package: python-networkx Version: 1.7~rc1-3 Severity: normal Dear Maintainer, networkx raises TypeError when reading input from .gml file: $ python cart_product.py c3.gml c3.gml graph [ node [ id 0 Traceback (most recent call last): File "cart_product.py", line 22, in <module> for line in nx.generate_gml(X): File "/usr/lib/pymodules/python2.7/networkx/readwrite/gml.py", line 328, in generate_gml yield 2*indent+'label %s'%label TypeError: not all arguments converted during string formatting Bug is affecting Debian stable and sid. It seems that version 1.7-2 in Debian experimental contains the same bug, since it contains the same line in file gml.py. It seems that bug is fixed by applying the following patch (tested for debian stable and sid): --- a/networkx/readwrite/gml.py +++ b/networkx/readwrite/gml.py @@ -325,7 +325,7 @@ label=G.node[n].get('label',n) if is_string_like(label): label='"%s"'%label - yield 2*indent+'label %s'%label + yield 2*indent+'label {0}'.format(label) if n in G: for k,v in G.node[n].items(): if k=='id' or k == 'label': continue -- System Information: Debian Release: 7.3 APT prefers stable APT policy: (500, 'stable') Architecture: amd64 (x86_64) Kernel: Linux 3.2.0-4-amd64 (SMP w/2 CPU cores) Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8) Shell: /bin/sh linked to /bin/dash Versions of packages python-networkx depends on: ii python 2.7.3-4+deb7u1 ii python-support 1.0.15 Versions of packages python-networkx recommends: ii python-matplotlib 1.1.1~rc2-1 ii python-numpy 1:1.6.2-1.2 ii python-pkg-resources 0.6.24-1 ii python-pygraphviz 1.1-2 ii python-scipy 0.10.1+dfsg2-1 ii python-yaml 3.10-4 python-networkx suggests no packages. -- no debconf informationgraph [ comment "C_3" node [ id 1 ] node [ id 2 ] node [ id 3 ] edge[ source 1 target 2 ] edge[ source 2 target 3 ] edge[ source 3 target 1 ] ]#!/usr/bin/env python import networkx as nx import sys def cart_product(G, H): X = nx.Graph() for u in G.nodes(): for v in H.nodes(): X.add_node((u,v)) for u in X.nodes(): for v in X.nodes(): if (G.has_edge(u[0], v[0]) and u[1] == v[1]) or \ (H.has_edge(u[1], v[1]) and u[0] == v[0]): X.add_edge(u, v) return X if __name__ == '__main__': G = nx.read_gml(sys.argv[1]) H = nx.read_gml(sys.argv[2]) X = cart_product(G, H) for line in nx.generate_gml(X): print line
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--- Begin Message ---Version: 1.9+dfsg1-1 On Fri, Jan 17, 2014 at 7:36 PM, Matus Valo <[email protected]> wrote: > networkx raises TypeError when reading input from .gml file: This is already fixed. Regards, -- Sandro Tosi (aka morph, morpheus, matrixhasu) My website: http://matrixhasu.altervista.org/ Me at Debian: http://wiki.debian.org/SandroTosi
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