Edit: SOLVED

So I managed to solve it just after I published this post. For anyone 
needing a solution like this here is how I did it

I set the python command in the bat file to point directly to which python 
version I wanted to run and hey presto it works :)

set PYTHONVERSION=C:\Anaconda\python.exe

set FILEPATH=%1
set ARG=%2

%PYTHONVERSION% "%UNITMANAGERPATH%\scripts\__main__.py" %FILEPATH% %ARG%

Cheers,

Ben

On Monday, 6 July 2015 13:43:02 UTC+2, Benjam901 wrote:
>
> Hello all,
>
> So I am slightly stumped as to what is happening with my batch file.
>
> I am running an export process from Maya that executes a batch file using 
> subprocess. Inside the batch file is an execution to another python script 
> that error checks the Maya export.
>
> Running the batch using cmd  is great and works as expected.....however 
> when I try to do this inside of the Maya script it throws an lxml error 
> because of the python it is using.
>
> I checked the python exe that it is using and it is using *C:\Program 
> Files\Autodesk\Maya2015\bin\python.exe* which is strange because running 
> *python 
> 'myscript.py' *in the batch file should run using the machines python 
> version.
>
> *The reason for running it through a .bat file is because I need it to be 
> run as a standalone application as well as an under the hood checker.*
>
>
> *Here is what my bat file looks like for the most part:*
> set 
> PYTHONPATH=C:\Anaconda\Lib\site-packages;%UNITMANAGERPATH%\scripts;%UNITMANAGERPATH%\UI;
>
> set FILEPATH=%1
> set ARG=%2
>
> python "%UNITMANAGERPATH%\scripts\__main__.py" %FILEPATH% %ARG%
>
> *And the execution line inside my maya python script:*
>
> def debugUnit(unitPath=''):
>       import subprocess
>       unitDebuggerBat = os.getenv('MAYATOOLSPATH')+'\\cmd\\unit_debugger.bat'
>  
>       return subprocess.check_output([unitDebuggerBat, unitPath, 
> 'False']).split('UNITERROR')[-1].strip()
>
>
> *Just incase the description was confusing here is the process:*
>
> *Export from Maya > Run .bat file from the export script > run python 
> error check script from .bat file*
>
> From what I am aware of running *python 
> "%UNITMANAGERPATH%\scripts\__main__.py" %FILEPATH% %ARG% *should run 
> using my machines Python which is Anaconda but it is using Maya's python 
> which is very confusing.
>
> Is there an additional command that I need to run in the .bat file to make 
> it completely separate from Maya's python exe?
>
> Any help would be much appreciated as always :)
>
> Cheers!
>
> Ben
>
>

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