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HI all,
this is probably a question that has been answered on the wiki, but i can't seem to find it.
I decided to try and upgrade my version of Numeric (currently 23.1) (building the latest Biopython was causing errors) but the packagmanager gives me a 404 errror opening http://www.python.org/packman/version-0.3/darwin-7.80- Power_Macintosh.plist.
I've tried the official unofficial database, but when i attempt to upgrade numeric I get told that there is no package for apple installed python 2.3 download manually. I thought all macpython used apples python now?
ealier in the night i tried to install a few packages, like reportlab, and the packager appeared to die half way through. I was letting me download packages, but have i corrupted its database?
Can i repair this, or should I attempt to build all these packages by hand. If so can anyone resolve the errors in building i have below?
cheers
Kim
Building numeric 23.7 from the source dies,
building 'lapack_lite' extension
gcc -Wl,-F. -Wl,-F. -bundle -framework Python build/temp.darwin-7.8.0-Power_Macintosh-2.3/Src/lapack_litemodule.o - -L/usr/lib/atlas -llapack -lcblas -lf77blas -latlas -lg2c -o build/lib.darwin-7.8.0-Power_Macintosh-2.3/lapack_lite.so -framework vecLib
ld: warning -L: directory name (/usr/lib/atlas) does not exist
ld: can't locate file for: -llapack
error: command 'gcc' failed with exit status 1
Building Biopython1.40b
fails with
Bio/Cluster/clustermodule.c:2:33: Numeric/arrayobject.h: No such file or directory
Bio/Cluster/clustermodule.c:20: error: parse error before "PyArrayObject"
Bio/Cluster/clustermodule.c:2:33: Numeric/arrayobject.h: No such file or directory
Bio/Cluster/clustermodule.c:20: error: parse error before "PyArrayObject"
Dr Kim Branson Peter Doherty Fellow Protein Structure and Function St Vincents Institute for Medical Research 41 Victoria Parade, Fitzroy Victoria 3065, Australia. Phone: +613 9288 2480 Fax: +613 94162 676 Ph +613 9662 7136 [EMAIL PROTECTED] [EMAIL PROTECTED] www.svi.edu.au -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.2.4 (Darwin)
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