Thanks for your replies. I managed to come up with something that worked!

I had to do a couple of things, for those that are interested…

I needed to upgrade py2app to version 0.8, which fixed a problem in the version 
we were using (0.7.3) where file permissions were not preserved when copying 
files into the application bundle. As an aside, I tried the most recent version 
(0.14), but it created a new and different problem (which I can’t recall at the 
moment).
In the pkgbuild command, I had been using —root instead of —component when 
creating the component package from the application. Using —root made a package 
that expected to install its own python, which is why it was trying to mess 
with the /System Python.Framework directory. Using —component made things work. 
:)

Hope may this will help someone someday.

-EricF

> On Dec 23, 2017, at 10:38 AM, Sean Wayland <seanwayl...@gmail.com> wrote:
> 
> The other thing I remember is that tkinter is incompatible with py2app.. 
> 
> On Dec 23, 2017 10:21 AM, "Sean Wayland" <seanwayl...@gmail.com 
> <mailto:seanwayl...@gmail.com>> wrote:
> I tried this once. My vague memory of it is that py2app only works with one 
> version of Python. Did you try using Python 3 instead? You might be able to 
> use JUCE to create a standalone application instead of py2app
> 
> On Dec 22, 2017 4:52 PM, <eric.feigen...@editshare.com 
> <mailto:eric.feigen...@editshare.com>> wrote:
> I hope someone on this list can help… I haven’t been able to find many 
> answers on the web.
> 
> Environment: Mac OS 10.8 & 10.11, Python 2.7.6, py2app 0.14
> 
> I create a Mac application bundle from python, using `py2app`, on Mac OS 
> 10.8. This seems to work fine. I then build an installer package using 
> `pkgbuild` and `productbuild`. That appears to build with no errors, until I 
> try to use the installer to install the package.
> 
> I'm running the installer on MacOS 10.11 (it will also have to run on MacOS 
> 10.8-10.13). The installation fails, with the following in the install.log:
> 
> Dec 21 15:14:46 Erics-10-11-Mac-VM shove[30757]: [src=nonrestricted] 
> /System/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7/pyconfig.h:
>  unable to remove flag 0x80000 (error 1)
> Dec 21 15:14:46 Erics-10-11-Mac-VM shove[30757]: [source=file] failed 
> _RelinkFile(/var/folders/zz/zyxvpxvq6csfxvn_n0000000000000/C/PKInstallSandboxManager/3BE46873-2E16-4787-81A4-335FB1DCB67B.activeSandbox/Root/Applications/MyApp.app/Contents/Resources/include/python2.7/pyconfig.h,
>  
> /System/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7/pyconfig.h):
>  Operation not permitted
> Dec 21 15:14:46 Erics-10-11-Mac-VM shove[30757]: srcPath = 
> /var/folders/zz/zyxvpxvq6csfxvn_n0000000000000/C/PKInstallSandboxManager/3BE46873-2E16-4787-81A4-335FB1DCB67B.activeSandbox/Root/Applications/MyApp.app/Contents/Resources/include/python2.7/pyconfig.h
>  NSFileOwnerAccountID=0 NSFileHFSTypeCode=0 NSFileSystemFileNumber=1025119 
> NSFileExtensionHidden=0 NSFileSystemNumber=16777219 NSFileSize=36515 
> NSFileGroupOwnerAccountID=0 NSFileOwnerAccountName=root 
> NSFileCreationDate=2017-12-21 20:12:33 +0000 NSFilePosixPermissions=420 
> NSFileHFSCreatorCode=0 NSFileType=NSFileTypeRegular 
> NSFileGroupOwnerAccountName=wheel NSFileReferenceCount=1 
> NSFileModificationDate=2017-12-21 20:12:33 +0000
> 
> The issue seems to be that the installer wants to copy (or do something with) 
> `Contents/Resources/include/pyconfig.h` into 
> `/System/Library/Frameworks/Python.framework...` but that operation is not 
> permitted. It's presumably not permitted due to the MacOS System Integrity 
> Protection on `/System/`.
> 
> This raises a couple of questions:
> 
>  1. What exactly is the installer trying to do by copying `pyconfig.h` into a 
> System directory (which is expressly prohibited?) Besides, there's already a 
> `pyconfig.h` there.
>  3. What can I do to fix this? Somehow tell `py2app` not to put `pyconfig.h` 
> in the `include` folder? Tell the installer to not copy it into the `System` 
> folder? Is there a workaround? Disabling `SIP` is not an option.
> 
> Note that I'm constrained to build on MacOS 10.8, and install on arbitrary 
> systems from MacOS 10.8 - 10.3.
> 
> Thanks for your help!
> 
> -EricF
> 
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