Dear all, I just installed R 2.5.0alpha and noticed new warnings related to the extractor "$" when using contributed packages. For instance:
> library(RODBC) Warning message: $ operator is not valid for atomic vectors, returning NULL > library(aod) Package aod, version 1.1-18 > data(orob2) > m1 <- betabin(cbind(y, n-y) ~ 1, random = ~ 1, data = orob2) > head(residuals(m1)) 1 2 3 4 5 6 -1.4629774 -0.7897877 -1.3754283 0.1029910 -0.3556985 1.4030026 Warning message: $ operator not defined for this S4 class, returning NULL In these two cases, I deleted the former installations and re-built the packages from sources. How to overcome this problem ? Kind regards, Renaud ################## > sessionInfo() R version 2.5.0 alpha (2007-03-30 r40957) i386-pc-mingw32 locale: LC_COLLATE=French_France.1252;LC_CTYPE=French_France.1252;LC_MONETARY=French_France.1252;LC_NUMERIC=C;LC_TIME=French_France.1252 attached base packages: [1] "stats" "graphics" "grDevices" "utils" "datasets" "tcltk" "methods" "base" other attached packages: aod RODBC fortunes svIO R2HTML svMisc svSocket svIDE "1.1-18" "1.1-8" "1.3-2" "0.9-5" "1.58" "0.9-5" "0.9-5" "0.9-5" -- Renaud LANCELOT Département Systèmes Biologiques du CIRAD CIRAD, Biological Systems Department Campus International de Baillarguet TA 30 / B F34398 Montpellier Tel +33 (0)4 67 59 37 17 Secr. +33 (0)4 67 59 37 37 Fax +33 (0)4 67 59 37 95 ______________________________________________ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel