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The problem first appeared in R 2.6.1 and is still there in R 2.6.2
On Windows running R CMD check command for glmpath package fails. The =
reason
seems to be that when R is running the examples file (glmpath-Ex.R), it =
skips
about 50 lines and as a result gives a syntax error.=20
I'm working with a modified version of the CRAN glmpath 0.94. My version
happens to give a more clear example of a problem than the original one. =
Lines 86-89 of glmpath-Ex.R:
bootstrap.a <- bootstrap.path(heart.data$x, heart.data$y,
B=3D10, method=3D"bic")
## End Don't show
bootstrap.a
Lines 130-133 of glmpath-Ex.R:
### Name: cv.coxpath
### Title: Computes cross-validated (minus) log-partial-likelihoods for
### coxpath
### Aliases: cv.coxpath
The end of glmpath-Ex.Rout:
> bootstrap.a <- bootstrap.path(heart.data$x, heart.data$y,
+ B=3D10, method=3D"bic")
> al-likelihoods for
Error: unexpected 'for' in "al-likelihoods for"
Execution halted
I've contacted Mee Young who replied: "It failed for some obscure =
reasons,
but CRAN admins thought that the issue was Fortran's I/O interfering =
with C.=20
However, the glmpath windows binary from any earlier version of R works
under the current version of R."
We've never observed this problem on LINUX.
--please do not edit the information below--
Version:
platform =3D i386-pc-mingw32
arch =3D i386
os =3D mingw32
system =3D i386, mingw32
status =3D=20
major =3D 2
minor =3D 6.1
year =3D 2007
month =3D 11
day =3D 26
svn rev =3D 43537
language =3D R
version.string =3D R version 2.6.1 (2007-11-26)
Windows XP (build 2600) Service Pack 2.0
Locale:
LC_COLLATE=3DEnglish_United States.1252;LC_CTYPE=3DEnglish_United
States.1252;LC_MONETARY=3DEnglish_United
States.1252;LC_NUMERIC=3DC;LC_TIME=3DEnglish_United States.1252
Search Path:
.GlobalEnv, package:stats, package:graphics, package:grDevices,
package:utils, package:datasets, package:methods, Autoloads, =
package:base
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