Dear Uwe:

Thanks very much. Based on your suggestion, I deleted "C:\\Users\\sgraves\\Documents/R/win-library/2.9", which got created when I first installed R 2.9.1 into the default, write-protected area and then did "install.packages". When I uninstalled that write-protected copy and installed it in a different location, the directory "C:\\Users\\sgraves\\Documents/R/win-library/2.9" remained, and Rgui directed "install.packages" to that directory, though Rterm did not. I had not intentionally set "R_LIBS" nor any other special thing like that, so I was confused.

     Thanks again.
     Best Wishes,
     Spencer


Uwe Ligges wrote:


spencerg wrote:

What do I need to do to get "install.packages" to work properly for me in R 2.9.1 under Vista?

Currently, install.packages in Rgui 2.9.1 by default goes to "C:\\Users\\sgraves\\Documents/R/win-library/2.9". This is a problem for me, because R running under Emacs does not currently look there.

I made the mistake last night of first installing R 2.9.1 in the default "C:\Program Files". When I found that packages I installed using Rgui could not be found from within Emacs, I uninstalled R from "C:\Program Files" and reinstalled it under "C:\Users\sgraves\R" alongside R 2.9.0, which has allowed "install.packages" from Rgui to be accessed from R under Emacs.

     I've traced the problem to the different behavior of ".libPaths()":

*** Rgui: .libPaths()
[1] "C:\\Users\\sgraves\\Documents/R/win-library/2.9"
[2] "C:/Users/sgraves/R/R-2.9.1/library"
*** R under Emacs: > .libPaths()
[1] "c:/Users/sgraves/R/R-2.9.1/library"


     What do you suggest?      Thanks,



Either set for the second setup "C:\\Users\\sgraves\\Documents/R/win-library/2.9" as a default library path (e.g. via env var R_LIBS) or remove it from the first setup (in a personal startup file).

Best wishes,
Uwe



     Spencer

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