Hi Kruno --
Krunoslav Sever wrote:
> Hello all!
>
> I am not sure if this is known or even intended, but please consider the
> following simple example code:
>
> # set up a simple S4 class with single slot
> setClass("b", representation = representation(x = "numeric"))
>
> # provide initialize method
> setMethod("initialize",
> signature(.Object = "b"),
> function(.Object,...) b.initialize(.Object,...)
> )
>
> # actual implementation of initialize method external
> b.initialize <- function(kl, x = numeric(),...) {
> k...@x <- x
> kl
> }
>
> # this gives an error in R-2.9.2
> test <- new("b", x = 1:2, k = 3, y = 2)
>
> What apparently happens is that the k=3 part in ... for b.initialize is
> assigned to kl while the initial "b" object that should be assigned to
> kl ends up in "..." of b.initialize.
This is R argument matching at work
> f <- function(.Object, ...) g(.Object, ...)
> g <- function(kl, x, ...) match.call()
> f(1, x=2, k=3)
g(kl = 3, x = 2, .Object)
specifically partial matching of named arguments taking precedence of
positional matching of unnamed arguments.
> I assume this is due to the naming similarity of k and kl, probably
> confusing the matching algorithm: if another first argument for
> b.initialize is used (not starting with k), everything is fine.
>
> Other workarounds:
> - in setMethod write "kl = .Object" instead of simply ".Object"
yes, this avoids mixing matching by name and by position.
Martin Morgan
> - this does not happen if the contents of b.initialize are directly
> moved to the setMethod call, even if k is renamed to, say, .O
> This happened to me in a case where b is a subclass of another class
> which has a slot named k, so the "offending" k = 3 is not artificial here.
>
> I hope some dev here can look into the switching effect: this cannot
> possibly be intended?
>
> Here my sessioninfo():
>> sessionInfo()
> R version 2.9.2 (2009-08-24)
> i686-pc-linux-gnu
>
> locale:
> LC_CTYPE=de_DE.UTF-8;LC_NUMERIC=C;LC_TIME=de_DE.UTF-8;LC_COLLATE=de_DE.UTF-8;LC_MONETARY=C;LC_MESSAGES=de_DE.UTF-8;LC_PAPER=de_DE.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=de_DE.UTF-8;LC_IDENTIFICATION=C
>
>
> attached base packages:
> [1] stats graphics grDevices utils datasets methods base
>
> Best
> Kruno
>
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