L.S. In the current version of ?p.adjust.Rd, one needs to scroll down to the examples section to find confirmation of one's guess that "fdr" is an alias of "BH".
Please find a patch in attachment which mentions this explicitly. Best, Tobias
32c32 < Hochberg (1995) (\code{"BH"}), and Benjamini & Yekutieli (2001) --- > Hochberg (1995) (\code{"BH"} or its alias \code{"fdr"}), and Benjamini & Yekutieli (2001) 50,52c50,52 < The \code{"BH"} and \code{"BY"} method of Benjamini, Hochberg, and < Yekutieli control the false discovery rate, the expected proportion of < false discoveries amongst the rejected hypotheses. The false --- > The \code{"BH"} (aka \code{"fdr"}) and \code{"BY"} method of Benjamini, > Hochberg, and Yekutieli control the false discovery rate, the expected > proportion of false discoveries amongst the rejected hypotheses. The false
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