On Jun 29, 2011, at 5:33 AM, soeren.vo...@uzh.ch wrote:
Hello, the compilation of the GUTS package on CRAN for Mac produces
the following error messages:
http://www.r-project.org/nosvn/R.check/r-release-macosx-ix86/GUTS-00install.html
I guess it is some namespace collision, but I can not reproduce it
on my machine, it compiles fine here. What is the cause and which
setup do I need to reproduce the errors?
I was going to suggest you take this up with the maintainers... but
you _are_ one of the maintainers.
Here is the output from an attempt to compile from source, version
0.1.45, with a relatively recent version of R 2.13.0 (but not the most
recent and I still use Mac OSX 10.5.8). Perhaps its brevity will be
helpful, and the fact that it seems to identify different error than
those flagged in the log at CRAN.
trying URL 'http://lib.stat.cmu.edu/R/CRAN/src/contrib/GUTS_0.1.45.tar.gz'
Content type 'application/x-gzip' length 9842 bytes
opened URL
==================================================
downloaded 9842 bytes
Loading required package: lattice
Loading required package: sos
Loading required package: brew
[1] "2011-06-29 09:40:18 EDT"
* installing *source* package ‘GUTS’ ...
** libs
*** arch - i386
g++ -arch i386 -I/Library/Frameworks/R.framework/Resources/include -I/
Library/Frameworks/R.framework/Resources/include/i386 -I/opt/local/
include -I/usr/local/include -I"/Library/Frameworks/R.framework/
Versions/2.13/Resources/library/Rcpp/include" -fPIC -g -O2 -c
GUTS.cpp -o GUTS.o
In file included from GUTS.cpp:12:
GUTS.h:21:28: error: boost/random.hpp: No such file or directory
GUTS.h:22:40: error: boost/math/distributions.hpp: No such file or
directory
GUTS.cpp: In function ‘void to_print(double)’:
GUTS.cpp:277: error: ‘cout’ was not declared in this scope
GUTS.cpp: In member function ‘void GUTS::showObject()’:
GUTS.cpp:281: error: ‘cout’ is not a member of ‘std’
GUTS.cpp:284: error: ‘cout’ was not declared in this scope
make: *** [GUTS.o] Error 1
ERROR: compilation failed for package ‘GUTS’
* removing ‘/Library/Frameworks/R.framework/Versions/2.13/Resources/
library/GUTS’
> sessionInfo()
R version 2.13.0 beta (2011-04-04 r55296)
Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
locale:
[1] en_US.UTF-8/en_US.UTF-8/C/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] mgcv_1.7-6 sos_1.3-0 brew_1.0-6 lattice_0.19-26
loaded via a namespace (and not attached):
[1] grid_2.13.0 Matrix_0.999375-50 nlme_3.1-101
tools_2.13.0
--
David.
R: version
platform i386-apple-darwin9.8.0
arch i386
os darwin9.8.0
system i386, darwin9.8.0
status
major 2
minor 13.0
year 2011
month 04
day 13
svn rev 55427
language R
version.string R version 2.13.0 (2011-04-13)
I ~ $: gcc --version
i686-apple-darwin10-gcc-4.2.1 (GCC) 4.2.1 (Apple Inc. build 5666)
(dot 3)
Copyright (C) 2007 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There
is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR
PURPOSE.
I ~ $: less /opt/local/include/boost/version.hpp
// Boost version.hpp configuration header file
------------------------------//
[...]
#define BOOST_VERSION 104601
#define BOOST_LIB_VERSION "1_46_1"
[...]
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David Winsemius, MD
West Hartford, CT
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