Thanks Kasper, that seems to do it:
$ url=https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/codetoolsBioC
$ svn checkout --username readonly --password readonly $url
$ R CMD build codetoolsBioC
$ R CMD INSTALL codetoolsBioC
$ R
> library("codetoolsBioC")
> deps <- findExternalDeps("MASS")
attaching required packages 'MASS'
Loading required package: MASS
> str(deps)
List of 4
$ S4Classes: list()
$ S4Methods:List of 1
..$ methods: chr "body<-"
$ functions:List of 5
..$ base : chr [1:248] "-" "!" "!=" "$" ...
..$ graphics : chr [1:16] "abline" "axis" "box" "frame" ...
..$ grDevices: chr [1:5] "dev.flush" "dev.hold" "nclass.FD" ...
..$ methods : chr "new"
..$ stats : chr [1:97] ".checkMFClasses" ".getXlevels" ...
$ variables:List of 1
..$ base: chr [1:4] ".GlobalEnv" ".Machine" ".Options" "pi"
>
Great!
/Henrik
On Fri, Nov 14, 2014 at 8:41 PM, Kasper Daniel Hansen
<kasperdanielhan...@gmail.com> wrote:
> The best thing I have found is codetoolsBioC in the Bioconductor subversion
> repository.
>
> Best,
> Kasper
>
> On Fri, Nov 14, 2014 at 9:57 PM, Henrik Bengtsson <h...@biostat.ucsf.edu>
> wrote:
>>
>> Hi,
>>
>> I'd like to list all package PkgA functions that another package PkgB
>> use via Depends or Imports (ignoring Suggests for simplicity). As
>> long as PkgB uses importFrom("PkgA", ...) it's just a matter of
>> parsing the NAMESPACE file or inspecting
>> asNamespace("PkgB")$.__NAMESPACE__.$imports. However, what can be
>> done in case PkgB uses import("PkgA")? Is there a function/package
>> already available for this?
>>
>> Thanks,
>>
>> Henrik
>>
>> ______________________________________________
>> R-devel@r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/r-devel
>
>
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