With a relatively recent r-devel snapshot,

R> x <- matrix(1:9, 3)
R> x1 <- matrix(51:54, 2)
R> x[c(NA, 2, 3), 1:2] <- x1
Error in "[<-"(`*tmp*`, c(NA, 2, 3), 1:2, value = x1) :
number of items to replace is not a multiple of replacement length
R> x2 <- matrix(101:106, 3)
R> x[c(NA, 2, 3), 1:2] <- x2
R> x
[,1] [,2] [,3]
[1,] 1 4 7
[2,] 101 103 8
[3,] 102 104 9


This was a little surprising to me. I expected the assignment to succeed in the first case and either fail or at least give a warning in the second case. I also tried this on Splus.

Splus> x <- matrix(1:9, 3)
Splus> x1 <- matrix(51:54, 2)
Splus> x[c(NA, 2, 3), 1:2] <- x1
Splus> x
[,1] [,2] [,3]
[1,] 1 4 7
[2,] 51 53 8
[3,] 52 54 9
Splus> x2 <- matrix(101:106, 3)
Splus> x[c(NA, 2, 3), 1:2] <- x2
Warning messages:
Replacement length not a multiple of number of elements to replace in: x[c(NA
, 2, 3), 1:2] <- x2
Splus> x
[,1] [,2] [,3]
[1,] 1 4 7
[2,] 101 103 8
[3,] 102 104 9


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