ggobi Rggobi Result
1.0-1-beta 1.1-0 segfault
1.0-1-beta 1.1-1 segfault
1.0-0-beta 1.1-0 segfault
1.0-0-beta 1.1-1 segfault
1.0-0 1.1-0 segfault
1.0-0 1.1-1 segfault
1.0-0 1.0.0 OK (with previously mentioned fix ammended as per BR's advice)
Obviously there are a couple of other combinations, but I'll stop there for now. Note that the ggobi builds are all with the default configure options.
A.J. Rossini wrote:
Brian is correct regarding the lists, but note that Rggobi 1.1 works for me (Duncan T-L sent me the following link which worked for me on an old R-H or SuSE system (sorry Dirk! not had a chance to change it yet...).
" Try the tar file at http://www.ggobi.org/Download/Rggobi_1.1-0.tar.gz "
best, -tony
On Wed, 24 Nov 2004 05:50:46 +0000 (GMT), Prof Brian Ripley <[EMAIL PROTECTED]> wrote:
Please note that is not the correct fix. From the ONEWS in 2.0.1:
o The undocumented C-level entry point R_IsNaNorNA has been removed. It was used in a couple of packages, and should be replaced by a call to the documented macro ISNAN.
The ggobi list are now operational again (or at least they have had a burst of activity), and that would be the appropriate place to pursue this.
On Wed, 24 Nov 2004, Richard Beare wrote:
Hi,
Thanks for that - I attempted to install the earlier versions I had been successful with before - Rggobi 1.0.0 and ggobi 1.0.0-beta. The R side of things wouldn't compile out of the box due to a change in the R_IsNaNorNA function. This caused a problem in RSGgobi.c, which I fixed by adding the following patch:
static int G_IsNaNorNA(double f) { return (R_IsNaN(f) || R_IsNA(f)); }
and changed GGobi_setMissingValueIdentifier(R_IsNaNorNA); to GGobi_setMissingValueIdentifier(G_IsNaNorNA);
I can at least load the package and start ggobi now.
Thanks
Dirk Eddelbuettel wrote:
Richard,
On Wed, Nov 24, 2004 at 01:54:36PM +1100, Richard Beare wrote:
Hi, I've had no luck with the combination of R-2.0.1 and Rggobi/gobi (1.1-1 and 1.0-1 beta). I've tried a default configuration of ggobi, as well as one with all the plugins enabled. I'm using RedHat 9 Linux.
The problem I'm experiencing is a segmentation fault when library.dynam is called from .First.lib
ggobi appears to work OK from the command line. I had an earlier combination working under R-1.8.1
Does anyone have fixes/suggestions?
It still works for me as this cut&pasted session log from ESS shows:
R : Copyright 2004, The R Foundation for Statistical Computing Version 2.0.1 (2004-11-15), ISBN 3-900051-07-0 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for a HTML browser interface to help. Type 'q()' to quit R. > options(STERM='iESS', editor='gnuclient -q') > library(Rggobi) > ggobi() [1] "ggobi reference (1)" > ## and the ggobi gtk console comes up
but I'd also be the first to tell you that I (as the maintainer of these Debian packages) kept the versions frozen as I had difficulties building the newer ggobi and/or Rggobi versions (and possible combinations, been a while I since I tried last):
[EMAIL PROTECTED]:~> COLUMNS=120 dpkg -l "*ggobi*" | cut -c -80 Desired=Unknown/Install/Remove/Purge/Hold | Status=Not/Installed/Config-files/Unpacked/Failed-config/Half-installed |/ Err?=(none)/Hold/Reinst-required/X=both-problems (Status,Err: uppercase=bad) ||/ Name Version Description +++-========================-========================-======================== ii ggobi 0.99.10-3 Data visualization syste ii r-omegahat-ggobi 0.53.0-4 GNU R package for the GG
Sources for these are on any Debian mirror and possibly also still on ggobi.org. Can't recall if we needed patches; if so they also be on the Debian mirrors.
Hope this helps, Dirk
-- Richard Beare, CSIRO Mathematical & Information Sciences Locked Bag 17, North Ryde, NSW 1670, Australia Phone: +61-2-93253221 (GMT+~10hrs) Fax: +61-2-93253200
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-- Brian D. Ripley, [EMAIL PROTECTED] Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ University of Oxford, Tel: +44 1865 272861 (self) 1 South Parks Road, +44 1865 272866 (PA) Oxford OX1 3TG, UK Fax: +44 1865 272595
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-- Richard Beare, CSIRO Mathematical & Information Sciences Locked Bag 17, North Ryde, NSW 1670, Australia Phone: +61-2-93253221 (GMT+~10hrs) Fax: +61-2-93253200
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