we're trying to implement R on the IBM p690 cluster "Jump" at the research centre in Jülich, Germany (c.f. http://www.fz-juelich.de/nic/Supercomputer/computer-e.html) using the most recent version of R (2.1.0) and precisly following the installation instructions.
.............
checking for cos in -lm... yes
checking for sin in -lm... yes
.............
checking for GNU gettext in libc... no
checking for GNU gettext in libintl... no
checking whether to use NLS... yes
checking where the gettext function comes from... included intl directory
...............
gcc -Wl,-bM:SRE -Wl,-H512 -Wl,-T512 -Wl,-bnoentry -Wl,- bexpall
-Wl,-bI:../../../etc/R.exp -L/usr/local/lib -o R_X11.so dataentry.lo
devX11.lo rotated.lo rbitmap.lo -lSM -lICE -lX11 -ljpeg -lpng -lz
ld: 0711-317 ERROR: Undefined symbol: .log10
ld: 0711-317 ERROR: Undefined symbol: .floor
ld: 0711-317 ERROR: Undefined symbol: .libintl_gettext
ld: 0711-317 ERROR: Undefined symbol: .pow
ld: 0711-317 ERROR: Undefined symbol: .sin
ld: 0711-317 ERROR: Undefined symbol: .cos
ld: 0711-317 ERROR: Undefined symbol: .tan
ld: 0711-345 Use the -bloadmap or -bnoquiet option to obtain more
information.
collect2: ld returned 8 exit status
There seem to be problems in the autoconf stuff. cos and sin are being located in libm but the link line you show has no '-lm' which accounts for 6 of the 7 missing symbols.
Also gettext seems to have been located by the configure script, but there is no option on the link line to include it in the link. Also search configure.in for strings like powerpc-ibm-aix to see what stuff is being done
specifically for AIX. It may be out of date in relation to your system.
If it was my problem, I would have look at those bits of the configure script and the sections of configure.in that generated them. Then I would compare the AC_SUBST variables with the makefile.in that generated the link. It seems there is some non- communication there.
Bill Northcott
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