On 01/12/2010 5:12 AM, Koray Kaya wrote:
Hello, I tried to use GEOQuery package of BioC. It does not download GSE. I investigated 
problem, understood that the problem was about internal function "download". 
Reccomendations about it mostly suggest switching any proxy off in R. I did, and nothing 
changed.
I use Ubuntu Lucid 64 bit
Thanks

You posted this twice, but in neither case did you post anything usable to answer the question. Please read the posting guide. (But you might want to post this question to a Bioconductor list: it looks like a problem with GEOQuery, not a general R problem. Packages shouldn't normally call .Internal() functions.)

Duncan Murdoch

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