Thank you Rui, that helped a lot. The correct values show up when I'm using
the following code. Now  fun(Temp,v)  returns a matrix, and  Temp  and   v  
stay the same. But I'd like to use the reduced vectors in some
calculations..can they be "extracted"  in some way so that I have them
separately again? 



fun <- function(Temp, v){ 
       unwanted <- Temp <= 16 | Temp >= 38.5 
Temp <- Temp[!unwanted] 
    v <- v[!unwanted] 
  list(Temp=Temp, v=v) 
  
} 

fun(Temp,v)

PS: thank you too,andrija..but it's not what I'm looking for


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