How do I use pboot to set the level of resampling (size of each resample) in
mantel()?
if I enter a value for pboot then the ulim==llim
> X<-dist(1:100)
> Y<-dist(1:100+50*rnorm(100))
> length(X)
[1] 4950
> print(mantel(X~Y,nperm=1000,nboot=1000,pboot=10))
mantelr pval1 pval2 pval3 llim.2.5% ulim.97.5%
0.1396906 0.0010000 1.0000000 0.0010000 0.1396906 0.1396906
if I do not set a value for pboot then
as expected ulim>llim
> print(mantel(X~Y,nperm=1000,nboot=1000))
mantelr pval1 pval2 pval3 llim.2.5% ulim.97.5%
0.1396906 0.0010000 1.0000000 0.0010000 0.1005011 0.1805416
many thanks
Nevil Amos
[[alternative HTML version deleted]]
______________________________________________
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
