On 14.08.2012 10:16, Franckx Laurent wrote:
Thanks for the quick response.
Concerning your first point: the spaces in " Inno Setup 5" are not spaces
between different directories, this was just the name of the directory as suggested
during the installation procedure. Anyway, I have now added underscores between the
individual words in the directory name and in the path definition.
No, you have to have
C:\R\R-2.15.0\bin\x64;c:\R\Rtools\bin;C.....
rather than
C:\R\R-2.15.0\bin\x64; c:\R\Rtools\bin; C
as you wrote in your original message.
Second, let me try to be more specific.
Basically, what I have done is modifying a few functions in an existing
package, in order to test whether my modifications would be an improvement
compared to the existing functionalities. I have therefore kept most of the
package as it was, including the folder structure. I have never encountered any
difficulties with the installation of the old package.
However, in order to avoid confusion between the existing package (let's call it
"oldpackage") and my trials (let's call them "newpackage"), I have modified the
name of the file with R code that contains the modified functions. I have also given a separate
name to my package, and I have modified the NAMESPACE accordingly.
The original package also contained C++ code, which was duly put in the "src" folder. When I first tried to
build my package, I had forgotten to first delete the dll created when "oldpackage" was built and I got
warnings that the "dll" files had not been declared. I have deleted them now. (I is not completely clear to
me whether I should run "R CMD SHLIB firstccfile.cc secondccfile.cc -o newpackage.dll" or not
No, that happens automatically when your package is installed (i.e. when
calling R CMD INSTALL).
- I have tried to do both with and without).
Now, when I run "R CMD build
Y:\Unit_TEM\3_TRAM\Projecten\N9393_ruimte_transport_model\newpackage", I get the
following messages:
*checking for file '
Y:\Unit_TEM\3_TRAM\Projecten\N9393_ruimte_transport_model\newpackage/DESCRIPTION'
.... OK
*preparing 'newpackage':
*checking DESCRIPTION meta-information ... OK
*cleaning src
*checking for LF line-endings in source and make files
*checking for empty or unneeded directories
*looking to see if a 'data/datalist' file should be added
*building 'newpackage.tar_0.1-6.gz'
Are you sure this is the error message?
That should be *building 'newpackage_0.1-6.tar.gz'
So we really need to see your package in order to learn why this fails.
Uwe Ligges
ERROR
Packaging into .tar.gz failed
When I check the package with R CMD check
Y:\Unit_TEM\3_TRAM\Projecten\N9393_ruimte_transport_model\newpackage, I get the following
info from "00install"
* installing *source* package 'newpackage'...
** libs
*** arch - i386
ERROR: compilation failed for package 'newpackage'
* removing 'C:/Users/franckxl/newpackage.Rcheck/newpackage'
And the following info from the corresponding log file:
* using log directory 'C:/Users/franckxl/newpackage.Rcheck'
* using R version 2.15.0 (2012-03-30)
* using platform: x86_64-pc-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'newpackage/DESCRIPTION' ... OK
* this is package 'newpackage' version '0.1-6'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... WARNING
Subdirectory 'newpackage/src' contains object files
firstccfile.o secondccfile.o
* checking if there is a namespace ... OK
* checking for .dll and .exe files ... OK
* checking whether package 'newpackage' can be installed ... ERROR
Installation failed.
See 'C:/Users/franckxl/newpackage.Rcheck/00install.out' for details.
I have verified similar error messages that were reported on various discussion forums,
and most answers I have seen suggested that this may be due to Rtools not being
installed. However, I have re-installed the most recent version of Rtools this morning,
so I cannot see how this could be the source of the problem. (At least, if it is
sufficient to install the R 2.15.x toolchain in a package that includes a C++ interface
- I do not find the explanation in the "R installation and administration"
manual very clear on this specific point.)
I hope this is sufficient information to clarify the problem.
-----Original Message-----
From: Uwe Ligges [mailto:[email protected]]
Sent: maandag 13 augustus 2012 19:29
To: Franckx Laurent
Cc: '[email protected]'
Subject: Re: [R] creation of package failed
On 13.08.2012 17:10, Franckx Laurent wrote:
Dear all
I am trying to build a package, and get the error message: ""packaging into .tar.gz
failed"".
I have also installed the same package directly from a locally created zip file. In this
case, the package is put correctly under C:\R\R-2.15.0\library. However, when I check the
package, I get another error message, stating "ERROR: compilation failed for
package".
I use a 64 bit computer.
Before attempting the installation, I had created the following path: PATH =
C:\R\R-2.15.0\bin\x64; c:\R\Rtools\bin; C:\R\Rtools\gcc-4.6.3\bin64;
C:\MiKTeX\miktex\miktex\bin; c:\windows; c:\windows\system32;
C:\Windows\SysWOW64; C:\Program Files (x86)\Inno Setup 5.
I have re-installed today the most recent version of Rtools.
Does anyone have an idea what is going wrong here?
Unsufficient information to know that, but the PATH above is incorrect, you
must not have spaces between the separate directories.
In addition, we need full information what you tried when you said R CMD build
and how the directory looked like. Do you have write permission in the parent
directory etc.
Uwe Ligges
Laurent Franckx, PhD
Expert
VITO NV
Boeretang 200, 2400 MOL, Belgium
Tel. + 32 14 33 58 22
Skype: laurent.franckx
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