On 13/08/2013 18:47, Jannis wrote:
Dear r users,


what could cause such an error:

"internal error -3 in R_decompress1"


unfortunately the error kills all my usual error catching mechanisms an
appears on a remote cluster so I can not really tell you which command
etc is causing it.

It is a corrupt package installation, so re-install.



Thanks for any hints on where to dig for the solution (or even the just
cause).

Jannis



R version 3.0.0 (2013-04-03)
Platform: x86_64-unknown-linux-gnu (64-bit)

locale:
  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C
  [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8
  [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8
  [7] LC_PAPER=C                 LC_NAME=C
  [9] LC_ADDRESS=C               LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] parallel  stats     graphics  grDevices datasets  utils methods
[8] base

other attached packages:
  [1] snowfall_1.84-4            snow_0.3-12
  [3] DistributionUtils_0.5-1    RUnit_0.4.26
  [5] RColorBrewer_1.0-5         plotrix_3.5
  [7] doMC_1.3.0                 iterators_1.0.6
  [9] multicore_0.1-7            plyr_1.8
[11] raster_2.1-49              sp_1.0-11
[13] abind_1.4-0                foreach_1.4.1
[15] RNetCDF_1.6.1-2            Rssa_0.9.10
[17] forecast_4.06              svd_0.3.2-1

loaded via a namespace (and not attached):
  [1] codetools_0.2-8  colorspace_1.2-2 compiler_3.0.0 fracdiff_1.4-2
  [5] grid_3.0.0       lattice_0.20-15  nnet_7.3-7 quadprog_1.5-5
  [9] tools_3.0.0      tseries_0.10-32  zoo_1.7-10

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--
Brian D. Ripley,                  rip...@stats.ox.ac.uk
Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
University of Oxford,             Tel:  +44 1865 272861 (self)
1 South Parks Road,                     +44 1865 272866 (PA)
Oxford OX1 3TG, UK                Fax:  +44 1865 272595

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and provide commented, minimal, self-contained, reproducible code.

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