Dear all,
my data looks the following:
df <- data.frame (experiment=c("E1","E2","E3","E4"), mean = c(3,4,5,6),
stdev=c(0.1,0.1,0.05,0.2), method = c("STD","STD", "FP", "FP"), enzyme =c
("T","T/L","T","T/L"), denaturation=c("U","U","0.05%RG", "0.1%RG"))
I would like to make a bar plot with standard deviation which I solved the
following way:
x <- df$experiment
y <- df$mean
sd <- df$stdev
df.plot <- qplot(x,y,xlab="", ylab="# peptides identified")+
geom_bar(colour="black", fill="darkgrey")+
geom_errorbar(aes(x=x, ymin=y-sd, ymax=y+sd), width=0.25)
df.plot
However, as the labels for the x-axis (the bars) I do not want the experiment
number, as now, but instead a table containing the other columns of my
data.frame (method, enzyme, denaturation) with the description in the front and
the certain 'value' below the bars.
I am looking forward to your suggestions!
With best wishes,
Nina
______________________________________________
Dr. Nina C. Hubner
scientist quantitative proteomics
Dep. of Molecular Biology, Radboud University Nijmegen, The Netherlands
e-mail: [email protected]
tel: +31-24-3613655
Visiting address:
NCMLS, Dept of Molecular Biology (route 274)
Geert Grooteplein 26/28
6525 GA Nijmegen
The Netherlands
The Radboud University Medical Centre is listed in the Commercial Register of
the Chamber of Commerce under file number 41055629.
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