But then how do you know which allele is the reference and which the risk allele (between A/T/C/G)?
2014-05-26 1:41 GMT+01:00 David Duffy <[email protected]>: > francesca casalino <[email protected]> asked: > > >> Does anyone know how to find the reference allele used for genetic >> associations ran in snpStats? >> >> A is ref allele, B is risk allele. > > > > [[alternative HTML version deleted]] ______________________________________________ [email protected] mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
