Try increasing the memory for pandoc via knitr YAML options:

--
title: "TITLE"
output:
  html_document:
    pandoc_args: [
      "+RTS", "-K64m",
      "-RTS"
    ]
---

ref: http://stackoverflow.com/a/28015894/1457051

you can bump up those #'s IIRC, too, if they don't work at first.

On Thu, Aug 27, 2015 at 1:55 PM, Conklin, Mike (GfK)
<mike.conk...@gfk.com> wrote:
> I have successfully done this many times using RStudio's rmarkdown 
> capabilities and knitting the document to HTML or Word. However, I am running 
> into this error today.
>
> "C:/Program Files/RStudio/bin/pandoc/pandoc" FusionTestsAugust25.utf8.md --to 
> docx --from 
> markdown+autolink_bare_uris+ascii_identifiers+tex_math_single_backslash-implicit_figures
>  --output FusionTestsAugust25.docx --highlight-style tango
> pandoc.exe: getMBlocks: VirtualAlloc MEM_COMMIT failed
> Error: pandoc document conversion failed with error 1
>
> Same error occurs whether to knitting to Word or to HTML.  It looks like the 
> a memory issue but this whole process is of limited use if the entire 
> analysis runs but the document can't be output.  If anyone has any ideas on 
> how to deal with memory issues in the final step of pandoc conversion or can 
> point me to where to look for this I would appreciate it.
>
> Best regards,
>
> Mike
>
>
> --
> W. Michael Conklin
> Executive Vice President
> Marketing & Data Sciences - North America
> GfK | 8401 Golden Valley Road | Minneapolis | MN | 55427
> mike.conk...@gfk.com
> T +1 763 417 4545 | M +1 612 567 8287
> www.gfk.com
>
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