It’s not clear to me what your actual structure is. Can you provide 
str(object)? Assuming it is a list, and you want the mean over all cells or 
columns, you might want like this:

myData <- vector("list", 3)

for(i in 1:3){
                myData[[i]] <- matrix(rnorm(100), 10, 10)
                }

### mean over all cells
sapply(myData, function(x) mean(x))

### mean over all columns
sapply(myData, function(x) colMeans(x))





From: lily li [mailto:chocol...@gmail.com]
Sent: Tuesday, May 09, 2017 10:44 AM
To: Doran, Harold <hdo...@air.org>
Cc: R mailing list <r-help@r-project.org>
Subject: Re: [R] About calculating average values from several matrices

I'm trying to get a new dataframe or whatever to call, which has the same 
structure with each file as listed above. For each cell in the new dataframe or 
the new file, it is the average value from former dataframes at the same 
location. Thanks.

On Tue, May 9, 2017 at 8:41 AM, Doran, Harold 
<hdo...@air.org<mailto:hdo...@air.org>> wrote:
Are you trying to take the mean over all cells, or over rows/columns within 
each dataframe. Also, are these different dataframes stored within a list or 
are they standalone?



-----Original Message-----
From: R-help 
[mailto:r-help-boun...@r-project.org<mailto:r-help-boun...@r-project.org>] On 
Behalf Of lily li
Sent: Tuesday, May 09, 2017 10:39 AM
To: R mailing list <r-help@r-project.org<mailto:r-help@r-project.org>>
Subject: [R] About calculating average values from several matrices

Hi R users,

I have a question about manipulating the data.
For example, there are several such data frames or matrices, and I want to 
calculate the average value from all the data frames or matrices. How to do it? 
Also, should I convert them to data frame or matrix first? Right now, when I 
use typeof() function, each one is a list.

file1
            jan   feb   mar   apr   may   jun   jul   aug   sep   oct   nov

app1   1.1   1.2    0.8    0.9   1.3    1.5   2.2   3.2   3.0    1.2   1.1
app2   3.1   3.2    2.8    2.5   2.3    2.5   3.2   3.0   2.9    1.8   1.8
app3   5.1   5.2    3.8    4.9   5.3    5.5   5.2   4.2   5.0    4.2   4.1

file2
            jan   feb   mar   apr   may   jun   jul   aug   sep   oct   nov

app1   1.9   1.5    0.5    0.9   1.2    1.8   2.5   3.7   3.2    1.5   1.6
app2   3.5   3.7    2.3    2.2   2.5    2.0   3.6   3.2   2.8    1.2   1.4
app3   5.5   5.0    3.5    4.4   5.4    5.6   5.3   4.4   5.2    4.3   4.2

file3 has the similar structure and values...

There are eight such files, and when I use the function mean(file1, file2, 
file3, ..., file8), it returns the error below. Thanks for your help.

Warning message:
In mean.default(file1, file2, file3, file4, file5, file6, file7,  :
  argument is not numeric or logical: returning NA
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