I have not intentionally set R_LIBS_USER. I looked for an Renviron.site file but did not see it in R/etc or my home directory. The strange part is that if I print Sud.getenv I see a value for R_LIBS_USER. However, this directory is not showing under libPaths.
I though .libPaths should contain R_LIBS_USER. I also noticed that R related variables are not in the system or user variables because I dont see them when I type SET from the Windows Command line. So a related question is where does R get the system variables (e.g., R_LIBS_USER, R_HOME) if I dont see a Renviron.site file. Thanks On Sep 16, 2017 10:45 AM, "Henrik Bengtsson" <henrik.bengts...@gmail.com> wrote: I'm not sure I follow what.the problem is. Are you trying to set R_LIBS_USER but R does not acknowledge it, or do you observe something in R that you didn't expect to be there and you are trying to figure out why that is / where that happens? Henrik On Sep 16, 2017 07:10, "Rene J Suarez-Soto" <rene.j.sua...@gmail.com> wrote: > I have a computer where R_LIBS_USER is not found in libPaths. This is for > Windows (x64). I ran R from the command line, RGui and RStudio and I get > the same results. I also ran R --vanilla and I still get the discrepancy. > > The only thing I found interesting was that I also ran SET from the command > line and the "R related variables" (e.g., R_HOME; R_LIBS_USER) are not > there. Therefore these variables are being set when I start R. I have not > been able to track where does R obtain the value for these. > > Aside from looking at > http://stat.ethz.ch/R-manual/R-patched/library/base/html/Startup.html I am > not sure I have much more information that I have found useful. > > Thanks > > R > > [[alternative HTML version deleted]] > > ______________________________________________ > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posti > ng-guide.html > and provide commented, minimal, self-contained, reproducible code. > [[alternative HTML version deleted]] ______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
