Thank you so much for the reply! I thought the file would automatically adjust accordingly. But I just checked and found pheatmap does has width as parameter! Ace
On Monday, September 18, 2017 3:00 PM, David Winsemius <dwinsem...@comcast.net> wrote: > On Sep 18, 2017, at 9:26 AM, Fix Ace via R-help <r-help@r-project.org> wrote: > > Dear R Community, > I tried to generate heatmap for a matrix of 1500 columns by 106 rows using > the following R script: >> pheatmap(tf.vs.DE.1.removeAllZeroCol, fontsize=3,border_color=NA) > and got the graph (as attached Fig 1) > > Since the column labels appear very crowded, I tried to increase the > cellwidth to stretch the graph horizontally. The idea was to show the graph > section by section, but with clear/readable column labels (not overlapped > labels). > So I typed: >> pheatmap(tf.vs.DE.1.removeAllZeroCol, >> fontsize=3,cellwidth=3,cellheight=3,border_color=NA) > However, this time I only got middle part of the original heatmap (as > attached Fig 2) > I wonder if there is way I could output the whole graph after such horizontal > stretch. If not, how do I get the left end of the graph. > Why not define a graphics device that is wider? -- David Winsemius Alameda, CA, USA 'Any technology distinguishable from magic is insufficiently advanced.' -Gehm's Corollary to Clarke's Third Law [[alternative HTML version deleted]] ______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.