yes all in one plot. So I want key (and therefore color)to be "Pold" and "Pnew" as those I am comparing per CHR so I used facet_wrap(~CHR) to create a graph per chromosome (on x-axis) On the end x-axis would have two strikes of Pold and Pnew (different colors) per one chromosome, and CHR would go from 1 to 22
On Thu, Jun 11, 2020 at 9:26 AM <cpolw...@chemo.org.uk> wrote: > > On 2020-06-11 14:54, Ana Marija wrote: > > Hello, > > > > I expected it to look like this: > > https://imgur.com/a/pj40c > > > > Ah - so all on the one plot? - so you don't want a facet. It puts two > plots side by side (or 22) > > > where x-axis would be CHR, there is 22 of them > >> unique(tmp.tidy$CHR) > > [1] 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 > > > > You have 22 plots all appearing side by size as part of the facet > > I think you want color=CHR - but I don't know what your current color > setting is doing. > > > I also have two phenotypes (keys) which I would like to compare > >> unique(tmp.tidy$key) > > [1] "Pold" "Pnew" > > > > So did you want to Facet those? ______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
