I understand the idea but I did not succeed.

Here is what I tried:

## 1.    middles of classes calculation

m <- tapply(DF$x, groups, mean)

## 2.     create a new factor columns with the levels deduced from
##         the values of the middles of the classes
##

DF$m <- DF$groups
levels(DF$m) <- as.character(m)
DF$m <- as.numeric(levels(DF$m))[DF$m]

## 3. I verify with xyplot

xyplot(   y ~ m
          , type = "p"
          , data=DF
          , scales = list(
            y = list(log=T)
            , x = list(log=T)

          )
)
## 4. I use the panel.groups and panel.bwplot to display the boxplots without success

xyplot(   y ~ m
          , groups = groups
          , type = "p"
          , data=DF
          , scales = list(
            y = list(log=T)
            , x = list(log=T)
            , panel = panel.superpose
            ,  panel.groups=function(x,y, group.number,...){
              panel.xyplot(x,y,...)
              panel.bwplot(x,y,...)
            }
            , horizontal = FALSE
            , box.width = .0001
          )
)


thx



Le 10/12/2022 à 17:02, Deepayan Sarkar a écrit :
Log-scales for the "factor" variable in bwplot() is not allowed.

You could, however, use the panel function panel.bwplot() with
xyplot(num ~ num). The potential problem with that is the box widths,
which panel.bwplot() will not know how to compute.

See if the following gives you a reasonable starting point:

DF <- within(DF, m <- tapply(y, groups, mean))
xyplot(y ~ m, DF, scales = list(log = TRUE),
        panel = panel.bwplot, horizontal = FALSE,
        box.width = .0001)

Best,
-Deepayan

On Sat, Dec 10, 2022 at 7:46 PM Laurent Rhelp <[email protected]> wrote:
Dear R-Help list,

     I would like to use bwplot from the lattice package with a log scale
both on
the x-axis and the y-axis but I do not know how to do that because I do
not know
how to change the factor x-axis in a numeric x-axis.

   Here is my example:


library(lattice)

# the mock data
y <- runif(100000,min=0, max=500)
x <- seq(0,500,length=length(y))
# I cut the x variable to create a factor variable in order to calculate
the boxes
groups <- cut(x,10,ordered_result = TRUE)
# creating the dataframe for the lattice functions
DF <- data.frame( x= x , y = y, groups = groups)


## ok for xyplot
xyplot(   y ~ x
            , data=DF
            , scales = list(
              y = list(log=T)
              , x = list(log=T)

            )
)

## ok for bwplot with the log scale for the y-axis
bwplot( y ~ groups
            , data=DF
            , scales = list(
              y = list(log=T)
              #     , x = list(log=T)

            )
)



## Non ok for bwplot with the log scale for the x-axis
bwplot( y ~ groups
          , data=DF
          , scales = list(
                y = list(log=T)
              , x = list(log=T)

          )
)
which gives an error because the x-axis is a factor, I would like to
replace it
for the display by the meddle of every class for example and put a log
scale on the x-axis.

Thank you for your help
Best regards
Laurent



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