On 10/23/2008 3:32 PM, Rob James wrote:
odfWeave is throwing up a cryptic error, after successfully processing a
file with a large number of figures (~30) and many \Sexpr{} calls. The
error is (at least to me) cryptic. I am not sure where to look to
correct this problem.
Here's the error:
Post-processing the contents
Error in .Call("RS_XML_Parse", file, handlers, endElementHandlers,
as.logical(addContext), :
attempt to apply non-function
That's a relatively difficult error to get: I think you usually need to
be messing around with expressions to see it. You can also get it in
simpler ways with nonsensical expressions, like
> 1(1)
Error: attempt to apply non-function
I'd say you'll need to do a traceback() to find out where this is coming
from. It's probably also worthwhile to track down those warnings() that
you were told about.
Duncan Murdoch
Is there any way to figure out what this means, or where I might look
for the error in the source?
Here's a capture of the associated log. I am running R 2.8 under Ubuntu
8.04.
Thanks,
> odfWeave("/home/rob/Trauma/Report_2_draft.odt",
"/home/rob/Trauma/Report_2_draft_out.odt")
Copying /home/rob/Trauma/Report_2_draft.odt
Setting wd to /tmp/Rtmp2tlRz0/odfWeave23115040235
Unzipping ODF file using unzip -o Report_2_draft.odt
Archive: Report_2_draft.odt
extracting: mimetype
creating: Configurations2/statusbar/
inflating: Configurations2/accelerator/current.xml
creating: Configurations2/floater/
creating: Configurations2/popupmenu/
creating: Configurations2/progressbar/
creating: Configurations2/menubar/
creating: Configurations2/toolbar/
creating: Configurations2/images/Bitmaps/
inflating: layout-cache
inflating: content.xml
inflating: styles.xml
extracting: meta.xml
inflating: Thumbnails/thumbnail.png
inflating: settings.xml
inflating: META-INF/manifest.xml
Removing Report_2_draft.odt
Creating a Pictures directory
Pre-processing the contents
Sweaving content.Rnw
Writing to file content_1.xml
Processing code chunks ...
1 : term hide(label=loadData)
d 2 : term verbatim(label=SiteHist)
ate()
3 : term verbatim(label=AgeSex)
4 : term verbatim(label=Sitesex)
5 : term verbatim(label=SiteHeadNeck)
6 : term verbatim(label=SiteFace)
7 : term verbatim(label=SiteChest)
8 : term verbatim(label=SiteAbdomnen)
9 : term verbatim(label=SiteGCS_Eyes)
10 : term verbatim(label=SiteGCS_Verbal)
11 : term verbatim(label=SiteGCS_Motor)
12 : term verbatim(label=SiteGCS_total)
13 : term verbatim(label=SBP)
14 : term verbatim(label=DBP)
15 : term verbatim(label=HR)
16 : term verbatim(label=RESPIRATION)
17 : term verbatim(label=PF_ADMIT)
18 : term verbatim(label=O2_admit)
19 : term verbatim(label=Ph_admit)
20 : term verbatim(label=DEFICIT)
21 : term verbatim(label=lactic_acid)
'content_1.xml' has been Sweaved
Removing content.xml
Post-processing the contents
Error in .Call("RS_XML_Parse", file, handlers, endElementHandlers,
as.logical(addContext), :
attempt to apply non-function
In addition: There were 50 or more warnings (use warnings() to see the
first 50)
> date()
[1] "Thu Oct 23 12:18:18 2008"
______________________________________________
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
______________________________________________
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
