Hallo R Users,
I have some distance matrix data like
> M[1:10,]
[,1] [,2] [,3] [,4] [,5] [,6]
[1,] 0.8750000 0.5000000 0.5000000 0.3750000 0.6250000 0.00000000
[2,] 0.8928571 1.0000000 0.0000000 0.8928571 0.1071429 0.00000000
[3,] 0.8928571 1.0000000 0.0000000 0.8928571 0.1071429 0.00000000
[4,] 0.8928571 1.0000000 0.0000000 0.8928571 0.1071429 0.00000000
[5,] 1.0000000 0.1304348 0.8695652 0.1304348 0.8695652 0.00000000
[6,] 1.0000000 0.1304348 0.8695652 0.1304348 0.8695652 0.00000000
[7,] 1.0000000 0.1304348 0.8695652 0.1304348 0.8695652 0.00000000
[8,] 0.9497743 0.7605977 0.2394023 0.7103720 0.2896280 0.00000000
[9,] 0.0754717 0.7169811 0.0000000 0.3584906 0.9245283 0.28301887
[10,] 0.3870968 0.9354839 0.0000000 0.4516129 0.6129032 0.06451613
where all the columns (1 to 6) are representing all possible pair-wise
combination from four datasets,
like
cmbn
[,1] [,2] [,3] [,4] [,5] [,6]
[1,] 1 1 1 2 2 3
[2,] 2 3 4 3 4 4
and all the rows represent different species
so;
> M[1,1]
[1] 0.875 ## is the distance value for species 1 for combination data
pair 1& 2.
Can any body please suggest me what will be the best way to represent these
results in plot?
Thanks a lot in advance,
With best regard,
Suparna
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