We are in the same boat (which I think is caused in my case by never
having been successful in installing a 64 bit version of Gtk+ on my
Mac, if such a beast exists). My errors are a tad bit different than
yours. Are you attempting this from an R64 version? I get no error
when I install Ruuid from the BioConductor binary repository and then
execute:
library(Ruuid) # no errors
(This question should have gone to either the Bioconductor mailing
list or the Mac-sig.list)
--
David.
> sessionInfo()
R version 2.9.2 (2009-08-24)
i386-apple-darwin9.8.0
locale:
en_US.UTF-8/en_US.UTF-8/C/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] Ruuid_1.22.0
loaded via a namespace (and not attached):
[1] tools_2.9.2
This was what happend when I ran the following code in the R64 GUI
console:
> source("http://bioconductor.org/biocLite.R";)
> biocLite("Ruuid")
Using R version 2.9.2, biocinstall version 2.4.12.
Installing Bioconductor version 2.4 packages:
[1] "Ruuid"
Please wait...
Warning in install.packages(pkgs = pkgs, repos = repos, dependencies =
dependencies, :
argument 'lib' is missing: using '/Users/davidwinsemius/Library/R/
2.9/library'
Warning: unable to access index for repository
http://brainarray.mbni.med.umich.edu/bioc/bin/macosx/leopard/contrib/2.9
trying URL
'http://bioconductor.org/packages/2.4/bioc/bin/macosx/leopard/contrib/2.9/Ruuid_1.22.0.tgz'
Content type 'application/x-gzip' length 70572 bytes (68 Kb)
opened URL
==================================================
downloaded 68 Kb
The downloaded packages are in
/var/folders/xS/xSUsVXTIHEiP7OLJg2OXmU+++TI/-Tmp-//RtmpoaE55s/
downloaded_packages
> library(Ruuid)
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared library '/Users/davidwinsemius/Library/R/2.9/
library/Ruuid/libs/x86_64/Ruuid.so':
dlopen(/Users/davidwinsemius/Library/R/2.9/library/Ruuid/libs/
x86_64/Ruuid.so, 6): Library not loaded: /Library/Frameworks/GTK
+.framework/Versions/2.14.X11/Resources/lib/libglib-2.0.0.dylib
Referenced from: /Users/davidwinsemius/Library/R/2.9/library/Ruuid/
libs/x86_64/Ruuid.so
Reason: no suitable image found. Did find:
/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/
libglib-2.0.0.dylib: no matching architecture in universal wrapper
Error: package/namespace load failed for 'Ruuid'
On Sep 18, 2009, at 2:58 PM, Christopher Bare wrote:
Hi,
I get an error indicating a missing library from the package 'Ruuid'.
I suppose this means I should install RGtk. I just thought I'd
document the error. Maybe a dependency entry is missing?
R 2.9.0
OS X 10.5.8
Thanks,
- chris
biocLite('Ruuid')
Using R version 2.9.0, biocinstall version 2.4.12.
Installing Bioconductor version 2.4 packages:
[1] "Ruuid"
Please wait...
Warning: unable to access index for repository
http://brainarray.mbni.med.umich.edu/bioc/bin/macosx/universal/contrib/2.9
trying URL
'http://bioconductor.org/packages/2.4/bioc/bin/macosx/universal/contrib/2.9/Ruuid_1.22.0.tgz'
Content type 'application/x-gzip' length 66343 bytes (64 Kb)
opened URL
==================================================
downloaded 64 Kb
The downloaded packages are in
/var/folders/n3/n3Xa3tJRED4hkXZd5y3QWk+++TI/-Tmp-//RtmpkHt9YC/
downloaded_packages
library(Ruuid)
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared library
'/Library/Frameworks/R.framework/Resources/library/Ruuid/libs/i386/
Ruuid.so':
dlopen(/Library/Frameworks/R.framework/Resources/library/Ruuid/libs/
i386/Ruuid.so,
6): Library not loaded:
/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/
libglib-2.0.0.dylib
Referenced from:
/Library/Frameworks/R.framework/Resources/library/Ruuid/libs/i386/
Ruuid.so
Reason: image not found
Error: package/namespace load failed for 'Ruuid'
Error in args(getuuid) : no function to return from, jumping to top
level
------------------------------------------------
J. Christopher Bare
Institute for Systems Biology
______________________________________________
[email protected] mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
David Winsemius, MD
Heritage Laboratories
West Hartford, CT
______________________________________________
[email protected] mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
