On Tue, 13 Apr 2010, Yvonnick Noel wrote:

Iurie,
Noel, thanks a lot. This will help me someday. But I have a question.
When we run Shapiro-Wilk test, the homogenity of variances is a
mandatory condition?
No it is not. An homoscedasticity test only makes sense when you have a grouping factor, and a normality test may of course be used in a variety of contexts when you have a unique sample.

My point was: If you use gaussian models and assume homogeneity of within-group variances, then testing normality is somewhat simplified, since your model residuals are expected to be drawn from a unique normal distribution, and only one normality test on the residuals is necessary (no need for a loop).


Or, as some of us would say, *no* normality test on the residuals is necessary, 
which is even simpler.

    -thomas

Thomas Lumley                   Assoc. Professor, Biostatistics
[email protected]        University of Washington, Seattle

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