Hi Arnaud,
I'm not sure how do to this with Hmis::summarize, but it's pretty easy with
plyr::ddply:
D <- read.table(textConnection("V1 V2 V3
A 1 -1
A 1 1
A -1 -1
B 1 1
B 1 1"), header=TRUE)
closeAllConnections()
corr.V2.V3 = function(x) {
out = cor(x$V2, x$V3)
names(out) = "CORR"
return(out)
}
library(plyr)
ddply(D, .(V1), corr.V2.V3)
-Ista
On Fri, Apr 16, 2010 at 9:21 AM, arnaud chozo <[email protected]>wrote:
> Hi all,
>
> I'd like to use the Hmisc::summarize function, but it uses a function (FUN)
> of a single vector argument to create the statistical summaries.
>
> Consider an easy case: I'd like to compute the correlation between two
> variables in my dataframe, grouped according to other variables in the same
> dataframe.
>
> For exemple, consider the following dataframe D:
> V1 V2 V3
> A 1 -1
> A 1 1
> A -1 -1
> B 1 1
> B 1 1
>
> I'd like to use Hmisc::summarize(X=D, by=llist(myvar=D$V1), FUN=corr.V2.V3)
>
> where corr.V2.V3 is defined as follows:
>
> corr.V2.V3 = function(x) {
> d = cbind(x$V2, x$V3)
>
> out = c(cor(d))
> names(out) = c("CORR")
> return(out)
> }
>
> I was not able to use Hmisc::summarize in this case because FUN should be a
> function of a matrix argument. Any idea?
>
> Thanks in advance,
> Arnaud
>
> [[alternative HTML version deleted]]
>
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> PLEASE do read the posting guide
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> and provide commented, minimal, self-contained, reproducible code.
>
--
Ista Zahn
Graduate student
University of Rochester
Department of Clinical and Social Psychology
http://yourpsyche.org
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