[R] a pickle with ranks and reals?

[John Christie]

I predicted that y would increase as x increased.  However, I only made 
the prediction on the ranks of the scores.  The ranks don't correlate 
with predicted.  And, I don't think a regression on the ranks is 
warranted.  However, the actual scores do yield a significant slope for 
b, and a significant R^2 using a linear regression (y is the value and 
x is the predicted rank).  What should my argument be here?  Should I 
have endorsed using the actual scores instead of ranks to begin for 
some reason that doesn't have anything to do with my current result? :)

Oh, on another note, I can use rcorr to get the Spearman correlations, 
but I'd like to be able to just add
the ranks as a column.  I was going to just use order and add a simple 
factor.  But, that doesn't deal with ties correctly.

And, I also wanted to analyze correlations subject by subject and 
compare my two groups.  However, there doesn't seem to be a good way to 
get this.  I tried using "by" with "cor".  However, this requires 
binding x and y which causes cor to return a matrix (if you could pass 
it x and y separate it would just return a number).

given

data frame s
x       y       subj
4       7       harry
5       1       harry
6       9       harry
2       4       steve
3       7       steve
...
i'd like to be able to produce

r       subj
.12     harry
.52     steve
...
any tips?

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