On Wed, Sep 24, 2003 at 02:47:21PM +0200, Martin Olivier wrote: > Hi all, > > The function heatmap uses the functions dist and hclust with default > parameters. > How to change these parameters? For example, i want to use the ward > criterion for hierarchical > clustering with binary distance. > > Best regards, > Olivier. > > ______________________________________________ > [EMAIL PROTECTED] mailing list > https://www.stat.math.ethz.ch/mailman/listinfo/r-help
Specify what you want through the parameters "distfun" and "hclustfun". Ex: my.dist <- function(x) dist(x, method="binary") my.hclust <- function(d) hclust(d, method="ward") hm <- heatmap(blablabla, distfun=my.dist, hclustfun=my.hclust) Hopin' it helps, L. -- -------------------------------------------------------------- Laurent Gautier CBS, Building 208, DTU PhD. Student DK-2800 Lyngby,Denmark tel: +45 45 25 24 89 http://www.cbs.dtu.dk/laurent ______________________________________________ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help
