OK, I found pretty much everything I needed in the short term on lme. However, I cannot find anything on the "type" flag in the anova command. When is it used and what for? In the examples I have found type="marginal" is usually entered for lme models with fixed effects.

This is one of the few items that I have done an entire R site search for without anything but other examples of this question - unanswered.

It is odd that there is no documentation for a value you can pass to one of the commands.

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