I have proportion data with binomial errors. The problem is that the whole experiment was laid out as a split-plot design.
Ideally, what I would like is having a glm with an Error term such as glm(y~x+Error(A/B)) but I fear this is not possible. Would using lme be an alternative? How could I state the variance structure, then?
I would very much appreciate any suggestions! Best regards Christoph
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