Hi,
I'm a sysadmin who's been tasked with installing R on our 1000-node compute cluster.
I have licences for the Intel C and FORTRAN compilers, so I'm using the following to compile:
CFLAGS="-O2 -axWK" FFLAGS=$CFLAGS CXXFLAGS=$CFLAGS
CC=icc F77=ifort CXX=icc
FPICFLAGS=-fpic
./configure --without-x --without-tcltk
The compilation seems to go OK, with a few warnings. What concerns me is when I run the make check - how long should this take? I've had one running for over 12 hours now, and it's still on:
running code in 'base-Ex.R' ...
and hasn't produced any output since; it just sits there burning CPU. I guess my question is: I'm sure someone has successfully compiled R on X86 Linux using the Intel compilers before - what options did you use to make it work? And how long should this check phase take?
Many thanks...
Tim
-- Dr Tim Cutts Informatics Systems Group Wellcome Trust Sanger Institute Hinxton, Cambridge, CB10 1SA, UK
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