Hairong Wei wrote:
Can anybody explain why RMA has to have a default normalization method:
quantile-quantile? Why don't leave the choices to users?
If I just want to use RMA to do a background correction without normalization, how should I specify the ? in the normalize.method="?" ?
What is RMA? It's not in base R, AFAIK.
Do you mean function rma() in the Bioconductor package "affy"? In this case please ask for help on the Bioconductor list.
Uwe Ligges
Hairong
[[alternative HTML version deleted]]
______________________________________________ [EMAIL PROTECTED] mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
______________________________________________ [EMAIL PROTECTED] mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
