Hi R-people,

I am wanting to run Factorial ANOVA followed by Scheffe tests on some spatial 
subjective data. I'm comparing X-Y independent coordinates against x-y 
dependent coordinates. There are only four independent spatial coordinates that 
form a square.

I am wondering whether I am doing the right thing, because there doesn't seem 
to be a simple way of doing this. I have attempted to read `Practical 
regression and ANOVA using R' and am still confused.

In good ol' Statview (now dearly departed) to complete a Scheffe test you 
selected the independent variables and dependent variable and it produced a  
table with the pairwise comparisons of the levels of the factor. I'm looking 
for a system that is as basic, but can be done using R and has documentation so 
I'm not guessing what I'm doing. I'd rather not have to do plots in R and then 
run over to dead software to do Scheffe's if possible.

I checked on google and there seems to be code for a couple of functions out 
there, but I need something that has a manual.

Is there a Scheffe function out there that is reasonably well documented, or 
should I consider some other method of dealing with this data. We have been 
using Scheffe for this type of analysis as I was under the impression it was 
very conservative. Tukey's HSD seems to be conservative as well. Should I try 
this? Is there a different approacch that is better and where can I read about 
it.

Thanks for any help you can provide.

Sam

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