R has *two* gam() functions in contributed packages 'mgcv' and 'gam'. Which is this?

Please see the posting guide and provide a reproducible example.

If this is package 'gam', prediction difficulties of this sort for the S version are discussed in the White Book, MASS and elsewhere (but I recall reading that they did not apply to the R version).


On Wed, 23 Mar 2005, Kerry Bush wrote:

Recently I was using GAM and couldn't help noticing
the following incoherence in prediction:

data(gam.data)
data(gam.newdata)

It is unusual to use data() on your own objects, but we cannot reproduce what you did without data.


gam.object <- gam(y ~ s(x,6) + z, data=gam.data)
predict(gam.object)[1]
       1
0.8017407

predict(gam.object,data.frame(x=gam.data$x[1],z=gam.data$z[1]))
       1
0.1668452

I would expect that using two types of predict
arguments should give me the same results.
When I used this to predict a new data set then it
seems OK:


predict(gam.object,data.frame(x=gam.newdata$x[1],z=gam.newdata$z[1]))
       1
0.4832136
predict(gam.object,gam.newdata)[1]
       1
0.4832136

Could anybody explain the strange behavior of
predict.gam function?


--
Brian D. Ripley,                  [EMAIL PROTECTED]
Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
University of Oxford,             Tel:  +44 1865 272861 (self)
1 South Parks Road,                     +44 1865 272866 (PA)
Oxford OX1 3TG, UK                Fax:  +44 1865 272595

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