"Mahdi Osman" <[EMAIL PROTECTED]> writes:

> Hi list,
>
> I am interested in cluster analysis of microarray data. The data was
> generated using cDNA method and a loop design.
>
>
> I was wondering if any one has a suggestion about which package I can
> use to analyse such data.

There are many packages within the Bioconductor project that provide
tools for analysis of microarray data.

I would start by taking a look at the Microarray and TwoChannel
BiocViews:

http://bioconductor.org/packages/1.8/Microarray.html
http://bioconductor.org/packages/1.8/TwoChannel.html

+ seth

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