I'm pretty sure your subject should be:

  Help configure R to use web proxy on RHEL4.

You don't have a Bioconductor specific problem (yet).

"Kesavan Asaithambi" <[EMAIL PROTECTED]> writes:
>> source("http://www.bioconductor.org/biocLite.R";)
>
> Error in file(file, "r", encoding = encoding) :
>
>         unable to open connection
>
> In addition: Warning message:
>
> unable to connect to 'www.bioconductor.org' on port 80.

Did you try reading the help for download.file?  Start R and then do:

   help(download.file)

+ seth

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