Cannot help you much with that as the thing seems to compile normally. As you use a global R installation, try giving yourself write permissions in /usr/lib/R/library, this might help. Otherwise, try installing R from source in your home or elsewhere where you have all write permissions and check it again.
Anyway, I wanted also to advertise my package because you use rimage: http://bioconductor.org/packages/2.0/bioc/html/EBImage.html The difference is - it supports up to 95 image formats and implements many image processing methods. In fact you can combine this with functions from rimage. If interested, go for a development version above and it works on Fedora 6 Zod and 2.4.1 - did try just today. Best regards, Oleg On 31/12/06, John Kornak <[EMAIL PROTECTED]> wrote: > > > Dear R list members > > I would be grateful if anyone could guide me to a solution for fixing my > rimage package problem described below. > > I recently upgraded my machine from fedora core 3 to fedora core 6 and > then upgraded R from version 2.3.1 from version 2.4.1. > > I then fired up R, tried to load the rimage library and received the > following messages: > > > library(rimage) > Error in dyn.load(x, as.logical(local), as.logical(now)) : > unable to load shared library > '/usr/lib/R/library/rimage/libs/rimage.so': > /usr/lib/R/library/rimage/libs/rimage.so: cannot restore segment prot > after reloc: Permission denied > Error in library(rimage) : .First.lib failed for 'rimage' > > > > I tried removing and re-installing rimage. The install seemed to go well > but I received the identical error messages upon loading. (I provide the > output from the package re-install at the very end of this email in case > it is useful.) > > I am running R version 2.4.1 and fc6 on a dual boot (with XP) Pentium 4 > Dell Dimension 8250. I have both fftw-2.1.5 and fftw-3.1.2 on my machine > within /usr/local and . > > rimage was working fine on the same machine before I upgraded from R > 2.3.1 and fc3. > > I searched online but was unable to find any relevant posts. > > Thanks again > > John > -- > John Kornak,PhD > Assistant Professor > Departments of Radiology, and Epidemiology & Biostatistics > University of California, San Francisco > Box 0946 > San Francisco, CA 94143 > Tel: (415) 353-4740 > fax: (415) 353-9423 > Email: [EMAIL PROTECTED] > > ############################################# > > > install.packages("rimage") > trying URL 'http://cran.cnr.Berkeley.edu/src/contrib/rimage_0.5-7.tar.gz' > Content type 'application/x-gzip' length 331029 bytes > opened URL > ================================================== > downloaded 323Kb > > * Installing *source* package 'rimage' ... > checking for g++... g++ > checking for C++ compiler default output... a.out > checking whether the C++ compiler works... yes > checking whether we are cross compiling... no > checking for suffix of executables... > checking for suffix of object files... o > checking whether we are using the GNU C++ compiler... yes > checking whether g++ accepts -g... yes > checking for gcc... gcc > checking whether we are using the GNU C compiler... yes > checking whether gcc accepts -g... yes > checking for gcc option to accept ANSI C... none needed > checking how to run the C preprocessor... gcc -E > checking for egrep... grep -E > checking for ANSI C header files... yes > checking for sys/types.h... yes > checking for sys/stat.h... yes > checking for stdlib.h... yes > checking for string.h... yes > checking for memory.h... yes > checking for strings.h... yes > checking for inttypes.h... yes > checking for stdint.h... yes > checking for unistd.h... yes > checking fftw.h usability... yes > checking fftw.h presence... yes > checking for fftw.h... yes > checking jpeglib.h usability... yes > checking jpeglib.h presence... yes > checking for jpeglib.h... yes > checking for inline... inline > checking for stdlib.h... (cached) yes > checking for GNU libc compatible malloc... yes > configure: creating ./config.status > config.status: creating src/Makevars > ** libs > g++ -I/usr/lib/R/include -I/usr/lib/R/include -g -O2 > -I/usr/local/include -fpic -O3 -g -c equalize.cpp -o equalize.o > gcc -I/usr/lib/R/include -I/usr/lib/R/include -g -O2 > -I/usr/local/include -fpic -O3 -g -std=gnu99 -c fftw_access_func.c > -o fftw_access_func.o > g++ -I/usr/lib/R/include -I/usr/lib/R/include -g -O2 > -I/usr/local/include -fpic -O3 -g -c freqfilters.cpp -o freqfilters.o > g++ -I/usr/lib/R/include -I/usr/lib/R/include -g -O2 > -I/usr/local/include -fpic -O3 -g -c interface.cpp -o interface.o > gcc -I/usr/lib/R/include -I/usr/lib/R/include -g -O2 > -I/usr/local/include -fpic -O3 -g -std=gnu99 -c jpegio.c -o jpegio.o > gcc -I/usr/lib/R/include -I/usr/lib/R/include -g -O2 > -I/usr/local/include -fpic -O3 -g -std=gnu99 -c laplacian.c -o > laplacian.o > laplacian.c: In function 'laplacian': > laplacian.c:14: warning: implicit declaration of function 'clearFrame' > g++ -I/usr/lib/R/include -I/usr/lib/R/include -g -O2 > -I/usr/local/include -fpic -O3 -g -c matrix.cpp -o matrix.o > gcc -I/usr/lib/R/include -I/usr/lib/R/include -g -O2 > -I/usr/local/include -fpic -O3 -g -std=gnu99 -c smooth.c -o smooth.o > gcc -I/usr/lib/R/include -I/usr/lib/R/include -g -O2 > -I/usr/local/include -fpic -O3 -g -std=gnu99 -c sobel.c -o sobel.o > g++ -shared -Bdirect,--hash-stype=both,-Wl,-O1 -o rimage.so equalize.o > fftw_access_func.o freqfilters.o interface.o jpegio.o laplacian.o > matrix.o smooth.o sobel.o -ljpeg -lfftw -L/usr/lib/R/lib -lR > ** R > ** data > ** help > >>> Building/Updating help pages for package 'rimage' > Formats: text html latex example > cat text html latex example > clipping text html latex example > equalize text html latex example > fftImg text html latex example > fftw text html latex > highpass text html latex example > imageType text html latex example > imagematrix text html latex example > laplacian text html latex example > logo text html latex example > lowpass text html latex example > meanImg text html latex example > minImg text html latex example > normalize text html latex example > plot.imagematrix text html latex example > print.imagematrix text html latex example > read.jpeg text html latex example > rgb2grey text html latex example > sobel text html latex example > sobel.h text html latex example > sobel.v text html latex example > thresholding text html latex example > ** building package indices ... > * DONE (rimage) > > The downloaded packages are in > /tmp/RtmprJeHV4/downloaded_packages > > library(rimage) > Error in dyn.load(x, as.logical(local), as.logical(now)) : > unable to load shared library > '/usr/lib/R/library/rimage/libs/rimage.so': > /usr/lib/R/library/rimage/libs/rimage.so: cannot restore segment prot > after reloc: Permission denied > Error in library(rimage) : .First.lib failed for 'rimage' > > > > ______________________________________________ > [email protected] mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. > [[alternative HTML version deleted]] ______________________________________________ [email protected] mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
