Johanna Hasmats wrote: > Ok, attaching all files. You need to run it in the following order: > > parse.RData > > Korrelation.RData I have reduced this script to only include the error > part. > > > Input files are in the following order: > > oligo.prest.out for parse.RData to work. Produces the next input file > > oligolista for Korrelation.RData to work, which also needs the input file > > 8_SkBr _13433630.gpr. > > > The function GenePixData can be found in the aroma package. > > Thank you for your help,
1. Package kth is unavailable for us. 2. I do not know anything about a package called "aroma", it is neither on CRAN nor in the BioC repositories. 3. Can you please also try to make your example smaller? 4. The convention is to save R objects in .Rdata files, but to have R code in .R files. Uwe Ligges > Johanna > > > > > > > > > ******************************************************************* > Johanna Hasmats > Royal Institute of Technology > AlbaNova University Center > Stockholm Center for Physics, Astronomy and Biotechnology > School of Molecular Biotechnology > Department of Gene Technology > Visiting address: > Roslagstullsbacken 21, Floor 3 > 106 91 Stockholm, Sweden > Delivering address: > Roslagsvägen 30 B > 104 06 Stockholm, Sweden > Phone (office) +46 8 553 783 44 > Fax + 46 8 553 784 81 > ****************************************************************** > > -----Original Message----- > From: Deepayan Sarkar [mailto:[EMAIL PROTECTED] > Sent: Friday, August 31, 2007 8:12 PM > To: Uwe Ligges > Cc: Johanna Hasmats; r-help@stat.math.ethz.ch > Subject: Re: [R] Bug? > > On 8/31/07, Uwe Ligges <[EMAIL PROTECTED]> wrote: >> >> Johanna Hasmats wrote: >>> Hi! >>> >>> >>> >>> How can I get around in R 2.5.1 in Windows: >>> >>> >>> >>> Error in strsplit(linebuffer, "") : object "linebuffer" not found >> >> Why should this be a bug in R, if you have no object named "linebuffer" >> in the environments that are on the search path. > > This sounds like it could have something to do with the command > completion mechanism through package rcompgen (which does use an > internal variable called 'linebuffer'). Since this doesn't seem to be > a common problem, you need to give us instructions on how to reproduce > it. > > -Deepayan ______________________________________________ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
