That is my next thing to try. Thanks for your help!
Erin Hodgess, PhD mailto: erinm.hodg...@gmail.com On Fri, Sep 14, 2018 at 2:46 PM Avraham Adler <avraham.ad...@gmail.com> wrote: > No, I’m sorry, I haven’t seen that and I built R 3.5.1 with OpenBLAS > recently. Does it work if you use the vanilla BLAS? > > Avi > > On Fri, Sep 14, 2018 at 4:14 PM Erin Hodgess <erinm.hodg...@gmail.com> > wrote: > >> Hi again! >> >> I checked everything, did "make distribution" and the same thing occurred. >> >> >> d:/Rtools/mingw_64/bin/ar -rucs ../SuiteSparse_config.a >> SuiteSparse_config.o >> D:\Rtools\mingw_64\bin\nm.exe: 'sublibs': No such file >> d:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o Matrix.dll >> tmp.def CHMfactor.o Csparse.o TMatrix_as.o Tsparse.o init.o Mutils.o >> chm_common.o cs.o cs_utils.o dense.o dgCMatrix.o dgTMatrix.o dgeMatrix.o >> dpoMatrix.o dppMatrix.o dsCMatrix.o dsyMatrix.o dspMatrix.o dtCMatrix.o >> dtTMatrix.o dtrMatrix.o dtpMatrix.o factorizations.o ldense.o lgCMatrix.o >> sparseQR.o abIndex.o -LD:/erinm/R-3.5.1/bin/x64 -lRlapack >> -LD:/erinm/R-3.5.1/bin/x64 -lRblas -LD:/erinm/R-3.5.1/extsoft/lib/x64 >> -LD:/erinm/R-3.5.1/extsoft/lib -LD:/erinm/R-3.5.1/bin/x64 -lR >> CHMfactor.o:CHMfactor.c:(.text+0x3b): undefined reference to >> `cholmod_copy_factor' >> CHMfactor.o:CHMfactor.c:(.text+0x7b): undefined reference to >> `cholmod_change_factor' >> CHMfactor.o:CHMfactor.c:(.text+0x92): undefined reference to >> `cholmod_factor_to_sparse' >> CHMfactor.o:CHMfactor.c:(.text+0xa5): undefined reference to >> `cholmod_free_factor' >> CHMfactor.o:CHMfactor.c:(.text+0x18e): undefined reference to >> `cholmod_solve' >> CHMfactor.o:CHMfactor.c:(.text+0x267): undefined reference to >> `cholmod_copy_factor' >> CHMfactor.o:CHMfactor.c:(.text+0x27e): undefined reference to >> `cholmod_updown' >> CHMfactor.o:CHMfactor.c:(.text+0x396): undefined reference to >> `cholmod_spsolve' >> CHMfactor.o:CHMfactor.c:(.text+0x620): undefined reference to >> `cholmod_factorize_p' >> CHMfactor.o:CHMfactor.c:(.text+0x658): undefined reference to >> `cholmod_change_factor' >> CHMfactor.o:CHMfactor.c:(.text+0x720): undefined reference to >> `cholmod_copy_factor' >> CHMfactor.o:CHMfactor.c:(.text+0x87b): undefined reference to >> `cholmod_copy_factor' >> CHMfactor.o:CHMfactor.c:(.text+0x8c3): undefined reference to >> `cholmod_free_factor' >> Csparse.o:Csparse.c:(.text+0x9f1): undefined reference to >> `cholmod_sparse_to_dense' >> Csparse.o:Csparse.c:(.text+0xcd6): undefined reference to `cholmod_speye' >> Csparse.o:Csparse.c:(.text+0xd21): undefined reference to `cholmod_add' >> Csparse.o:Csparse.c:(.text+0xd31): undefined reference to >> `cholmod_free_sparse' >> Csparse.o:Csparse.c:(.text+0xd3d): undefined reference to >> `cholmod_copy_sparse' >> Csparse.o:Csparse.c:(.text+0xd4c): undefined reference to >> `cholmod_free_sparse' >> Csparse.o:Csparse.c:(.text+0xdf9): undefined reference to `cholmod_copy' >> >> Does this look familiar, please? >> >> Thanks, >> Erin >> >> Erin Hodgess, PhD >> mailto: erinm.hodg...@gmail.com >> >> >> On Fri, Sep 14, 2018 at 1:13 PM Avraham Adler <avraham.ad...@gmail.com> >> wrote: >> >>> Try following the directions here. They have worked for me for years. >>> Please see the comments too. >>> >>> https://www.avrahamadler.com/r-tips/build-openblas-for-windows-r64/ >>> >>> Hope that helps, >>> >>> Avi >>> >>> On Fri, Sep 14, 2018 at 2:34 PM Erin Hodgess <erinm.hodg...@gmail.com> >>> wrote: >>> >>>> Hello! >>>> >>>> I'm building a package that needs Openblas for matrix manipulation >>>> speed up. >>>> >>>> I built Openblas on Windows 10. I updated the MkRules.local, >>>> src/extra/blas/Makefile.win, etc. Things are working with "make all". >>>> >>>> However, when I run "make recommended", I have trouble with the Matrix >>>> package build. The components of the Cholesky all appear as >>>> unreferenced. >>>> >>>> Has anyone else run into this, please? I'm working with R-3.5.1 source. >>>> >>>> Thanks, >>>> Erin >>>> >>>> Erin Hodgess, PhD >>>> mailto: erinm.hodg...@gmail.com >>>> >>>> [[alternative HTML version deleted]] >>>> >>>> ______________________________________________ >>>> R-package-devel@r-project.org mailing list >>>> https://stat.ethz.ch/mailman/listinfo/r-package-devel >>>> >>> -- >>> Sent from Gmail Mobile >>> >> -- > Sent from Gmail Mobile > [[alternative HTML version deleted]] ______________________________________________ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
