I have tried the suggestion from the blog post and added
|strippedLib: $(SHLIB) if test -e "/usr/bin/strip" & test -e
"/bin/uname" & [[ `uname` == "Linux" ]] ; \ then /usr/bin/strip
--strip-debug $(SHLIB); fi .phony: strippedLib|
||
||
|to `src/Makevars` and it works great, it gets the size of the shared
object down to 1.3 Mb.|
|When submitting this to CRAN some day, should I apply this trick or
ignore it and let the user|
|decide with the new ``R CMD install --strip`` option in R 3.6? Cheers,
Guido |
||
|
|
On 12/11/19 2:25 PM, Guido Kraemer wrote:
Thanks, I wasn't aware about these blog posts. I have just read a
little bit of gcc documentation and the `-flto` flag has to be
provided also in the compile steps, doing this
PKG_CPPFLAGS=-I"../inst/include" -flto
PKG_LIBS=-lstdc++fs -flto
reduces the size of the final `.so` to under 1Mb, but gives a warning
in `R CMD check --as-cran` because `-flto` doesn't seem to be portable.
Cheers,
Guido
On 12/11/19 2:15 PM, Iñaki Ucar wrote:
On Wed, 11 Dec 2019 at 14:07, Guido Kraemer
<gkrae...@bgc-jena.mpg.de> wrote:
I am building an R package (https://github.com/gdkrmr/zarr-R) that
wraps
a couple of C++ headers and the resulting shared object is huge (>20Mb,
see https://travis-ci.org/gdkrmr/zarr-R). I have tried to set the
following in `./src/Makevars`:
PKG_CPPFLAGS=-I"../inst/include" -ffunction-sections -fdata-sections
PKG_LIBS=-lstdc++fs -flto -Wl,--gc-sections
but this does not reduce the size of the shared object and produces
some
warnings in `R CMD check` due to portability issues. Is there a way to
reduce the size of the shared object or do I just have to live with it?
Hi, see Dirk's http://dirk.eddelbuettel.com/blog/2019/03/27/ and
related posts (linked in the first paragraph).
Iñaki
--
Guido Kraemer
Max Planck Institute for Biogeochemistry Jena
Department for Biogeochemical Integration
Hans-Knöll-Str. 10
07745 Jena
Germany
phone: +49 3641 576293
e-mail: gkrae...@bgc-jena.mpg.de
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